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Protein Overview: AGL5_ARATH

General Information:
Name(s) found: AGL5_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||E39534 floral homeotic protein AGL5 - Arabidopsis thaliana [NCBI NR]
  • gi|52548150|gb|AAU82078.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548148|gb|AAU82077.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548146|gb|AAU82076.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548144|gb|AAU82075.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548142|gb|AAU82074.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548140|gb|AAU82073.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548138|gb|AAU82072.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548136|gb|AAU82071.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548132|gb|AAU82069.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548130|gb|AAU82068.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548128|gb|AAU82067.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548126|gb|AAU82066.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548124|gb|AAU82065.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548122|gb|AAU82064.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548120|gb|AAU82063.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548118|gb|AAU82062.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548116|gb|AAU82061.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548114|gb|AAU82060.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548112|gb|AAU82059.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548110|gb|AAU82058.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548108|gb|AAU82057.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548106|gb|AAU82056.1| SHATTERPROOF2 [Arabidopsis thaliana] [NCBI NR]
  • gi|20197962|gb|AAD21741.2| floral homeodomain transcription factor (AGL5) [Arabidopsis thaliana] [NCBI NR]
  • gi|18406070|ref|NP_565986.1| SHP2 (SHATTERPROOF 2); protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|166596|gb|AAA32735.1| transcription factor [NCBI NR]
  • gi|113515|sp|P29385.1|AGL5_ARATH RecName: Full=Agamous-like MADS-box protein AGL5 [NCBI NR]
  • Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=1 SV=1 [Swiss-Prot]
  • (P29385) Agamous-like MADS box protein AGL5 [athaliana3702.FASTAC.txt]
  • SHATTERPROOF2 [Arabidopsis thaliana]gi|52548148|gb|AAU82077.1| SHATTERPROOF2 [Arabidopsis thaliana]gi|52548146|gb|AAU82076.1| SHATTERPROOF2 [Arabidopsis thaliana]gi|52548144|gb|AAU82075.1| SHATTERPROOF2 [Arabidopsis thaliana]gi|52548142|gb|AAU82074.1| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Splice Isoform 1 of Agamous-like MADS box protein AGL5 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AGL5, SHP2 | SHP2 (SHATTERPROOF 2); transcription factor | chr2:17827679-17830883 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • SHATTERPROOF2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Agamous-like MADS-box protein AGL5 [nr-271106-contam.fasta]
  • SHP2 (SHATTERPROOF 2); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcription factor [nr-271106-contam.fasta]
  • floral homeodomain transcription factor (AGL5) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | chr2:17820602-17823806 FORWARD LENGTH=246 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 246 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: carpel development [IMP]
    regulation of transcription, DNA-dependent [ISS]
    ovule development [IMP]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL  60
   61 VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA NTQYYQQEAS KLRRQIRDIQ 120
  121 NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM 180
  181 YLRSKITERT GLQQQESSVI HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ 240
  241 PPLQLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] PSI-BLAST 18.39794 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [89..246] Pfam 34.619789 No description for PF01486.8 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.0368771990474 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle