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Protein Overview: AGL1_ARATH

General Information:
Name(s) found: AGL1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||A39534 floral homeotic protein AGL1 [similarity] - Arabidopsis thaliana [NCBI NR]
  • gi|7630073|emb|CAB88295.1| shatterproof 1 (SHP1)/ agamous-like 1 (AGL1) [Arabidopsis thaliana] [NCBI NR]
  • gi|52548102|gb|AAU82054.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548100|gb|AAU82053.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548098|gb|AAU82052.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548096|gb|AAU82051.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548094|gb|AAU82050.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548092|gb|AAU82049.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548090|gb|AAU82048.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548088|gb|AAU82047.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548086|gb|AAU82046.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548084|gb|AAU82045.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548082|gb|AAU82044.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548080|gb|AAU82043.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548078|gb|AAU82042.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548076|gb|AAU82041.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548074|gb|AAU82040.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548072|gb|AAU82039.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548070|gb|AAU82038.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548068|gb|AAU82037.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548066|gb|AAU82036.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548064|gb|AAU82035.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548062|gb|AAU82034.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548060|gb|AAU82033.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|52548058|gb|AAU82032.1| SHATTERPROOF1 [Arabidopsis thaliana] [NCBI NR]
  • gi|21592324|gb|AAM64275.1| shatterproof 1 (SHP1)/ agamous-like 1 (AGL1) [Arabidopsis thaliana] [NCBI NR]
  • gi|166588|gb|AAA32730.1| transcription factor [NCBI NR]
  • gi|15231135|ref|NP_191437.1| SHP1 (SHATTERPROOF 1); DNA binding / protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|113511|sp|P29381.1|AGL1_ARATH RecName: Full=Agamous-like MADS-box protein AGL1; AltName: Full=Protein SHATTERPROOF 1 [NCBI NR]
  • Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1 [Swiss-Prot]
  • (P29381) Agamous-like MADS box protein AGL1 (Protein Shatterproof 1) [athaliana3702.FASTAC.txt]
  • SHATTERPROOF1 [Arabidopsis thaliana]gi|52548100|gb|AAU82053.1| SHATTERPROOF1 [Arabidopsis thaliana]gi|52548098|gb|AAU82052.1| SHATTERPROOF1 [Arabidopsis thaliana]gi|52548096|gb|AAU82051.1| SHATTERPROOF1 [Arabidopsis thaliana]gi|52548094|gb|AAU82050.1| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Agamous-like MADS box protein AGL1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AGL1, SHP1 | SHP1 (SHATTERPROOF 1); DNA binding / transcription factor | chr3:21750127-21752743 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • SHATTERPROOF1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcription factor [nr-271106-contam.fasta]
  • shatterproof 1 (SHP1)/ agamous-like 1 (AGL1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SHP1 (SHATTERPROOF 1); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Agamous-like MADS-box protein AGL1 (Protein Shatterproof 1) [nr-271106-contam.fasta]
  • | Symbols: SHP1, AGL1 | K-box region and MADS-box transcription factor family protein | chr3:21739150-21741766 FORWARD LENGTH=248 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: carpel development [IMP]
    ovule development [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEGGSSHDA ESSKKLGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL  60
   61 VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPSVTEA NTQYYQQEAS KLRRQIRDIQ 120
  121 NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKNEL LVAEIEYMQK REMELQHNNM 180
  181 YLRAKIAEGA RLNPDQQESS VIQGTTVYES GVSSHDQSQH YNRNYIPVNL LEPNQQFSGQ 240
  241 DQPPLQLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] PSI-BLAST 20.39794 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [95..248] Pfam 37.823909 No description for PF01486.8 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle