YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PIN7_ARATH

General Information:
Name(s) found: PIN7_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    plasma membrane [IDA]
    Biological Process: root development [IGI]
    auxin polar transport [IMP][ISS]
    pattern specification process [IGI]
    longitudinal axis specification [IMP]
    Molecular Function: auxin efflux transmembrane transporter activity [IDA]
    auxin:hydrogen symporter activity [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS  60
   61 SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW SITIFSLSTL PNTLVMGIPL 120
  121 LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD 180
  181 VVSLDGHDFL ETDAQIGDDG KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN 240
  241 TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF 300
  301 GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS 360
  361 DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK AGPMNGDYGG EEESERVKEV 420
  421 PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL 480
  481 IGLIWALVAF RWDVAMPKII QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA 540
  541 MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI 600
  601 FGMLIALPIT LVYYILLGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] MSA 129.146996 View MSA. No confident structure predictions are available.
    2 View Details [165..411] deduced N/A No confident structure predictions are available.
    3 View Details [412..619] PSI-BLAST 5.0 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains; Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains; Multidrug efflux transporter AcrB transmembrane domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle