| Protein: | PIN7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 619 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIN7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
691.0 | [0..1] | [573..1] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS 60
61 SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW SITIFSLSTL PNTLVMGIPL 120
121 LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-411] |
1 11 21 31 41 51
| | | | | |
1 FPETGASIVS FKVESDVVSL DGHDFLETDA QIGDDGKLHV TVRKSNASRR SFYGGGGTNM 60
61 TPRPSNLTGA EIYSLNTTPR GSNFNHSDFY SMMGFPGGRL SNFGPADMYS VQSSRGPTPR 120
121 PSNFEESCAM ASSPRFGYYP GGAPGSYPAP NPEFSTGNKT GSKAPKENHH HVGKSNSNDA 180
181 KELHMFVWGS NGSPVSDRAG LQVDNGANEQ VGKSDQGGAK EIRMLISDHT QNGENKAGPM 240
241 NGDYGGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [412-619] |
1 11 21 31 41 51
| | | | | |
1 EESERVKEVP NGLHKLRCNS TAELNPKEAI ETGETVPVKH MPPASVMTRL ILIMVWRKLI 60
61 RNPNTYSSLI GLIWALVAFR WDVAMPKIIQ QSISILSDAG LGMAMFSLGL FMALQPKLIA 120
121 CGNSTATFAM AVRFFTGPAV MAVAAMAIGL RGDLLRVAIV QAALPQGIVP FVFAKEYNVH 180
181 PAILSTGVIF GMLIALPITL VYYILLGL
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1oy6A |
| Description: | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains; Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains; Multidrug efflux transporter AcrB transmembrane domain |
Matching Structure (courtesy of the PDB): |
|
