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Protein Overview: PIN6_ARATH

General Information:
Name(s) found: PIN6_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana GN=PIN6 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 570 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: auxin polar transport [IMP][ISS]
    Molecular Function: auxin:hydrogen symporter activity [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITGNEFYTV MCAMAPLYFA MFVAYGSVKW CKIFTPAQCS GINRFVSVFA VPVLSFHFIS  60
   61 QNNPYKMDTM FILADTLSKI FVFVLLSLWA VFFKAGGLDW LITLFSIATL PNTLVMGIPL 120
  121 LQAMYGDYTQ TLMVQLVVLQ CIIWYTLLLF LFELRAARLL IRAEFPGQAA GSIAKIQVDD 180
  181 DVISLDGMDP LRTETETDVN GRIRLRIRRS VSSVPDSVMS SSLCLTPRAS NLSNAEIFSV 240
  241 NTPNNRFFHG GGGSGTLQFY NGSNEIMFCN GDLGGFGFTR PGLGASPRRL SGYASSDAYS 300
  301 LQPTPRASNF NELDVNGNGT PVWMKSPAAG RIYRQSSPKM MWESGQRHAA KDINGSVPEK 360
  361 EISFRDALKA APQATAAGGG ASMEEGAAGK DTTPVAAIGK QEMPSAIVMM RLILTVVGRK 420
  421 LSRNPNTYSS LLGLVWSLIS FKWNIPMPNI VDFSIKIISD AGLGMAMFSL GLFMALQPKM 480
  481 IPCGAKKATM GMLIRFISGP LFMAGASLLV GLRGSRLHAA IVQAALPQGI VPFVFAREYN 540
  541 LHPDLLSTLV IFGMIVSLPV TILYYVLLGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] Pfam 8.013228 No description for PF03547.9 was found. No confident structure predictions are available.
    2 View Details [170..353] FFAS03 1.23 30S subunit
    3 View Details [354..570] Pfam 18.568636 No description for PF03547.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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