| Protein: | PIN6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 570 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIN6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
563.0 | [0..1] | [570..1] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MITGNEFYTV MCAMAPLYFA MFVAYGSVKW CKIFTPAQCS GINRFVSVFA VPVLSFHFIS 60
61 QNNPYKMDTM FILADTLSKI FVFVLLSLWA VFFKAGGLDW LITLFSIATL PNTLVMGIPL 120
121 LQAMYGDYTQ TLMVQLVVLQ CIIWYTLLLF LFELRAARLL IRAEFPGQA
|
| Detection Method: |  |
| Confidence: | 8.013228 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [170-353] |
1 11 21 31 41 51
| | | | | |
1 AGSIAKIQVD DDVISLDGMD PLRTETETDV NGRIRLRIRR SVSSVPDSVM SSSLCLTPRA 60
61 SNLSNAEIFS VNTPNNRFFH GGGGSGTLQF YNGSNEIMFC NGDLGGFGFT RPGLGASPRR 120
121 LSGYASSDAY SLQPTPRASN FNELDVNGNG TPVWMKSPAA GRIYRQSSPK MMWESGQRHA 180
181 AKDI
|
| Detection Method: | |
| Confidence: | 1.23 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [354-570] |
1 11 21 31 41 51
| | | | | |
1 NGSVPEKEIS FRDALKAAPQ ATAAGGGASM EEGAAGKDTT PVAAIGKQEM PSAIVMMRLI 60
61 LTVVGRKLSR NPNTYSSLLG LVWSLISFKW NIPMPNIVDF SIKIISDAGL GMAMFSLGLF 120
121 MALQPKMIPC GAKKATMGML IRFISGPLFM AGASLLVGLR GSRLHAAIVQ AALPQGIVPF 180
181 VFAREYNLHP DLLSTLVIFG MIVSLPVTIL YYVLLGL
|
| Detection Method: | |
| Confidence: | 18.568636 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
