YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|665992

General Information:
Name(s) found: gi|665992 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|665992|dbj|BAA11696.1| LicT antiterminator [Bacillus subtilis] [NCBI NR]
    • Organism: Bacillus subtilis
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAKVINNN VISVVNEQGK ELVVMGRGLA FQKKSGDDVD EARIEKVFTL DNKDVSEKFK  60
   61 TLLYDIPIEC MEVSEEIIHY AKLQLGKKLN DSIYVSLTDH INFAIQRNQK GLDIKNALLW 120
  121 ETKRLYKDEF AIGKEALVMV KNKTGVSLPE DEAGFIALHI VNAELNEEMP NIINITKVMQ 180
  181 EILSIVKYHF KIEFNEESLH YYRFVTHLKF FAQRLFNGTH MESQDDFLLD TVKEKYHRAY 240
  241 ECTKKIQTYI EREYEHKLTS DELLYLTIHI ERVVKQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..52] PSI-BLAST 7.69897 LicT
    2 View Details [53..277] PSI-BLAST 42.69897 Structure of the native and inactive LicT PRD from B. subtilis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  2.56369131794526 bayes_pls_golite062009
  • transcription antiterminator activity
    		•  1.04498481068613 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle