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Protein Overview: DNAJ_BACSU

General Information:
Name(s) found: DNAJ_BACSU [Swiss-Prot]
Description(s) found:
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  • pir||B41874 heat shock protein dnaJ - Bacillus subtilis [NCBI NR]
  • gi|143060|gb|AAA22529.1| heat shock protein [Bacillus subtilis] [NCBI NR]
  • gi|1303809|dbj|BAA12465.1| DnaJ [Bacillus subtilis] [NCBI NR]
  • gi|118716|sp|P17631.2|DNAJ_BACSU RecName: Full=Chaperone protein dnaJ [NCBI NR]
  • Chaperone protein dnaJ OS=Bacillus subtilis GN=dnaJ PE=2 SV=2 [Swiss-Prot]
  • 372 aa - heat-shock protein (activation of DnaK) [subtilist_Price.fasta]
  • heat-shock protein [Bacillus subtilis subsp. subtilis str. 168]gi|2634992|emb|CAB14488.1| heat-shock protein [Bacillus subtilis subsp. subtilis str. 168]gi|538925|pir||B41874 heat shock protein dnaJ - Bacillus subtilisgi|1303809|dbj|BAA12465.1| DnaJ [B [nrdb_11152004_Chlamydomonas]
  • DnaJ [Bacillus subtilis] [nr-271106-contam.fasta]
  • Chaperone protein dnaJ [nr-271106-contam.fasta]
  • heat shock protein [nr-271106-contam.fasta]
    • Organism: Bacillus subtilis
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRDYYEVL GVSKSASKDE IKKAYRKLSK KYHPDINKEA GSDEKFKEVK EAYETLSDDQ  60
   61 KRAHYDQFGH TDPNQGFGGG GFGGGDFGGF GFDDIFSSIF GGGTRRRDPK LRARGADLQY 120
  121 TMTLSFEDAA FGKETTIEIP REETCETCKG SGAKPGTNPE TCSHCGGSGQ LNVEQNTPFG 180
  181 KVVNRRVCHH CEGTGKIIKN KCADCGGKGK IKKRKKINVT IPAGVDDGQQ LRLSGQGEPG 240
  241 INGGLPDLFV VFHVRAHEFF ERDGDDIYCE MPLTFAQAAL GDEVEVPTLH GKVKIPAGTQ 300
  301 TGTKFRLRGK GVQNVRGYGQ GDQHIVVRVV TPTNLTDKQK DIIREFAEVS GNLPDEQEMS 360
  361 FFDKVKRAFK GD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] PSI-BLAST 19.69897 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [91..372] PSI-BLAST 45.221849 The crystal structure of Hsp40 Ydj1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • unfolded protein binding
    		•  3.04403163860617 bayes_pls_golite062009
  • heat shock protein binding
    		•  2.17994194200939 bayes_pls_golite062009
  • binding
    		•  2.03854863870179 bayes_pls_golite062009
  • chaperone binding
    		•  1.61155546076854 bayes_pls_golite062009
  • protein binding
    		•  1.35701123337504 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2131700498174 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.12971478797926 bayes_pls_golite062009
  • DNA binding
    		•  0.8788643398536 bayes_pls_golite062009
  • Hsp70 protein binding
    		•  0.541755903922701 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein disulfide isomerase activity
    		•  2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing S-S bonds
    		•  2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting keto- and enol-groups
    		•  2.23398279564144 bayes_pls_golite062009
  • binding
    		•  2.13705208493215 bayes_pls_golite062009
  • unfolded protein binding
    		•  2.04158808514315 bayes_pls_golite062009
  • protein binding
    		•  1.32690171510656 bayes_pls_golite062009
  • catalytic activity
    		•  0.276917867171685 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle