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Protein Overview: rhp16

General Information:
Name(s) found: rhp16 / SPCC330.01c [Sanger Pombe]
Description(s) found:
Found 12 descriptions.
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  • Rad16 homolog Rhp16 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 963 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHISTLKVDQ LQNEAVDINS NDTIDSINWK NTRNNHTTQA SLQADNNDEQ SNGQAPFSTT  60
   61 YSEINNIHDV PGNQDEWSSS PIAGIIVESE DEEVVENNLH SQMGTSCNKI NSNSNKGKEN 120
  121 MHFVLDDNGD SKGNASNQQV ERDDKLDMET TRWNGKEFEE PLSTNKKLII QSNNTSSQHS 180
  181 TPPLSISDTS THTGSSTDNV EANPNTGFSS ARKRSLRSSN LKKKFVPLSS PEESNESEFI 240
  241 DDDESDEVAS IIDIKEDETF DSKVEIPEAA PSSSTESDEE SIPLSYQSKR RRVSARASSS 300
  301 ASSSSRTQAK SIPSHERTHY RLIRQHPELE HVWEKLEEEA PREVKQIEQP KELVLNLLPF 360
  361 QREGVYWLKR QEDSSFGGGI LADEMGMGKT IQTIALLLSE PRGKPTLVVA PVVAIMQWKE 420
  421 EIDTHTNKAL STYLYYGQAR DISGEELSSY DVVLTSYNVI ESVYRKERSG FRRKNGVVKE 480
  481 KSLLHQMEFY RIILDEAHGI KSRTCNTARA VCGLRTTRKI CLSGTPLQNR IGELFSLLRF 540
  541 LRADPFAYYY CLQCECKSLH WRFSDRSNCD ECGHKPMSHT CYFNAEMLKP IQKFGYEGPG 600
  601 KLAFKKVHSL LKHIMLRRTK LERADDLGLP PRVVEVRKDL FNEEEEDVYQ SLYMDSKRKF 660
  661 NTYLAEGVVL NNYANIFQLI TRMRQMADHP DLVLASKRKT VDIENQENIV CKICDEVAQD 720
  721 AIESRCHHTF CRLCVTEYIN AAGDGENVNC PSCFIPLSID LSAPALEDFS EEKFKNASIL 780
  781 NRIDMNSWRS STKIEALVEE LYLLRKKDRT LKSIVFSQFT SMLDLIHWRL RKAGFNCVKL 840
  841 DGGMTPKARA ATIEAFSNDI NITIFLVSLK AGGVALNLTE ASQVFMMDPW WNGAVQWQAM 900
  901 DRIHRIGQKR PIKVITLCIE NSIESKIIEL QEKKAQMIHA TIDQDEKALN QLSVEDMQFL 960
  961 FSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] deduced N/A No confident structure predictions are available.
    2 View Details [91..150] deduced N/A No confident structure predictions are available.
    3 View Details [151..338] deduced N/A No confident structure predictions are available.
    4 View Details [339..870] PSI-BLAST 38.09691 Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA
    5 View Details [871..963] PSI-BLAST 36.522879 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle