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Protein Overview: sfxn-1.2

General Information:
Name(s) found: sfxn-1.2 / CE35871 [WormBase]
Description(s) found:
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  • WBGene00009513 locus:sfxn-1.2 status:Confirmed UniProt:O17863 protein_id:CAB04347.3 [WormBase]
  • gi|71988586|ref|NP_496396.2| SideroFleXiN (mitochondrial iron transporter) family member (sfxn-1.2) [Caenorhabditis elegans] [NCBI NR]
  • gi|37619846|emb|CAB04347.3| C. elegans protein F37H8.4, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep115.fasta]
  • Hypothetical protein F37H8.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE35871 WBGene00009513 status:Partially_confirmed TR:O17863 protein_id:CAB04347.3 [wormpep150.fasta]
  • 35871 WBGene00009513 status:Partially_confirmed TR:O17863 protein_id:CAB04347.3 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Partially_confirmed TN:CAB04347 protein_id:CAB04347.3 [wormpep115.fasta.reversed]
  • CE35871 WBGene00009513 locus:sfxn-1.2 status:Confirmed UniProt:O17863_CAEEL protein_id:CAB04347.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE35871 WBGene00009513 locus:sfxn-1.2 status:Confirmed UniProt:O17863_CAEEL protein_id:CAB04347.3| [wormORF-contam.fasta]
  • F37H8.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE35871 WBGene00009513 locus:sfxn-1.2 status:Confirmed TR:O17863 protein_id:CAB04347.3 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE35871 WBGene00009513 locus:sfxn-1.2 status:Confirmed UniProt:O17863 protein_id:CAB04347.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE35871 WBGene00009513 locus:sfxn-1.2 status:Confirmed UniProt:O17863 protein_id:CAB04347.3 Sideroflexin [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Sideroflexin OS=Caenorhabditis elegans GN=sfxn-1.2 PE=3 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cation transport [IEALink to PubMed article]
    Molecular Function: cation transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELVSNLKT RPDISKPQWS QRTYYGRVRH FFTLTNPLTL TSSVARQEQC RQIVLDYKNG  60
   61 KVSPTLTVSE LWKAKTLYDS TYHPDTGEKM FFLGRMSAQM PANMLINGML LSLYRTFPGV 120
  121 VFSHWINQSF NAVVNYTNRS GNSKTSNERL ILSYSCATGG AMAAALSLNA MVKNKNSIAA 180
  181 RLVPFAAVAL ANTINIPMIR SNEVTEGLEL RDENGELLAR SRQMAILSIA QVTLSRIAMA 240
  241 MPDMVMTPII MNRITRTMYY RTRPWMKYSE YPIQTMLAGM ALFFTTPMCC ALFPQKTAVE 300
  301 VTKLEASVQK EIFSRADAPE VVFYNKGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] MSA 3.051943 View MSA. No confident structure predictions are available.
    2 View Details [170..328] MSA 6.051972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle