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Protein Overview: coh-3

General Information:
Name(s) found: coh-3 / CE35852 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00000592 locus:coh-3 status:Partially_confirmed UniProt:Q19232 protein_id:CAB01150.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: nuclear chromosome [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMP]
    meiotic chromosome segregation [IMP]
    meiosis [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVISIDVPLK ASEEATVKFL LGIVFGSHKK LGLQSNRREC FRHDVLQASK LIQWILSNER  60
   61 KNRRSLSIAC NLVYGNTIVL STQVARLLQD AIRAREIVAF TSYLAEEDER KRKTREQMEG 120
  121 DNSKTPKKKR RTMVEEFPLT PTPISVALKQ NITMPDVLSL HKNDQINVED DLAAPTMEQL 180
  181 EMMYGMLESE NRNTAIDLTF IDRYSSNDCR QNVHNLNLET DFQRPSDDFI RSQLMTPTKS 240
  241 IPQEEEFQPA THLKEMLLFR QLPITLDETE RRRSMEEEME EARNSGINTE FIPPQQMDVP 300
  301 RLVSENMDLD DEVSIPIRIP KVPLSATKKQ TSENEGAEEG INYKIPLREM HHIMEDYSSL 360
  361 HFKDPEPLYR KTSKVMNLKE LLNPIPYFLR KGCNTDMWDL FKVKTRKFDS TIGHDVSDTE 420
  421 EEDEDEETER RNRLKAELEP LETIDLSQMK FMTTPLKDKS PILTPVHRPE EIEFREELEL 480
  481 PRFEQFEPMN VNPISPKMEE PALFEDNWNS KPTWSNTSSE NIADALTIRG NIIRQLDDKS 540
  541 PFEVTLDSMI PVAATSRREA ARTFYTVLEL LKERKIKATQ RAPYENIDLL LSTDDSEDID 600
  601 DLAMADF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] deduced N/A No confident structure predictions are available.
    2 View Details [193..311] deduced N/A No confident structure predictions are available.
    3 View Details [312..458] deduced N/A No confident structure predictions are available.
    4 View Details [459..607] FFAS03 1.53 Sc Smc1hd:Scc1-C complex, ATPgS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.683379929086364 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.16959343932447 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0949481158963694 bayes_pls_golite062009
  • DNA binding
    		•  0.00746597740509714 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle