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Protein Overview: set-12

General Information:
Name(s) found: set-12 / CE35742 [WormBase]
Description(s) found:
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  • WBGene00019584 locus:set-12 status:Partially_confirmed UniProt:Q21404 protein_id:CCD67568.1 [WormBase]
  • gi|71993684|ref|NP_509306.2| SET (trithorax/polycomb) domain containing family member (set-12) [Caenorhabditis elegans] [NCBI NR]
  • gi|34850028|gb|AAB52674.2| Set (trithorax/polycomb) domain containing protein 12 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep111.fasta]
  • Hypothetical protein K09F5.5 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE35742 WBGene00019584 Zinc finger protein HRX status:Partially_confirmed TR:Q21404 protein_id:AAB52674.2 [wormpep150.fasta]
  • 35742 WBGene00019584 Zinc finger protein HRX status:Partially_confirmed TR:Q21404 protein_id:AAB52674.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Zinc finger protein HRX status:Partially_confirmed TN:AAB52674 protein_id:AAB52674.2 [wormpep115.fasta.reversed]
  • CE35742 WBGene00019584 locus:set-12 Zinc finger protein HRX status:Partially_confirmed UniProt:Q21404_CAEEL protein_id:AAB52674.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE35742 WBGene00019584 locus:set-12 Zinc finger protein HRX status:Partially_confirmed UniProt:Q21404_CAEEL protein_id:AAB52674.2| [wormORF-contam.fasta]
  • K09F5.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE35742 WBGene00019584 locus:set-12 Zinc finger protein HRX status:Partially_confirmed TR:Q21404 protein_id:AAB52674.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE35742 WBGene00019584 locus:set-12 Zinc finger protein HRX status:Partially_confirmed UniProt:Q21404 protein_id:AAB52674.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE35742 WBGene00019584 locus:set-12 Zinc finger protein HRX status:Partially_confirmed UniProt:Q21404 protein_id:CCD67568.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE35742 WBGene00019584 locus:set-12 status:Partially_confirmed UniProt:Q21404 protein_id:CCD67568.1 [wormpep246-ecoli-contam.fasta]
  • CE35742 WBGene00019584 locus:set-12 status:Partially_confirmed UniProt:Q21404 protein_id:CCD67568.1 Histone-lysine N-methyltransferase [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Histone-lysine N-methyltransferase OS=Caenorhabditis elegans GN=set-12 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: chromatin modification [IEALink to PubMed article]
    Molecular Function: histone-lysine N-methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGTRASTNK KTQLTKKNNS VFVYNTDPKF FPNTRRMDYS FICSPKRKTG LLTVTSCKCG  60
   61 TDCTTEECSN FANHRECPRG CSNCENQRFR KRQFCGVETF LTDNGIGHGL RATEEIATGK 120
  121 LILEYRGEAI TKAEHNKRVK RYKKDGIKHS YSFEVGRNYY VDPTRKGNSA RFINHSCNPN 180
  181 ALVKVWTVPD RPMKSLGIFA SKVIKPGEEI TFDYGTSFRN DQPCQCGEAA CRGWIGKPST 240
  241 SEVPKDVSKE LKKRGRKPKM DPTAPISTTS TGGGDKGKLS GTIPVPKSRR GRKRKTDVTA 300
  301 PVPLATKTKR HSPPAENESE DKENVKPPSE EDITNAMNNL LNKTYDNQNG VLDECRSIMG 360
  361 NLECKSYEHM VHKRVLFLLE KNMGLNSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 45.30103 No description for 2igqA was found.
    2 View Details [237..389] MSA 2.261994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle