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Protein Overview: CE35627

General Information:
Name(s) found: CE35627 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00012007 status:Partially_confirmed UniProt:Q22768 protein_id:CAA94376.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 420 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tetrapyrrole biosynthetic process [IEALink to PubMed article]
    biotin biosynthetic process [IEALink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    transferase activity, transferring nitrogenous groups [IEALink to PubMed article]
    transaminase activity [IEALink to PubMed article]
    glycine C-acetyltransferase activity [IEALink to PubMed article]
    5-aminolevulinate synthase activity [IEALink to PubMed article]
    transferase activity [IEALink to PubMed article]
    8-amino-7-oxononanoate synthase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNSILQFI RSIRPSTMRR CFSTATNYFE IHLKNELAGI KNAGTFKTER VIQGRQGVLV  60
   61 KVTGSDKPVI NFCANNYLGL SSHPEVIAAG QKALETHGAG LSSVRFICGT QDIHKELEQK 120
  121 IAQFHGTEDT ILYAACFDAN GGIFEVMTGE QDSIISDELN HASIIDGIRL SKAKRLRYKH 180
  181 LDLGDLESKL KEAEDSRFRL IVTDGVFSMD GDVAPLGDIT SLAEKYNALL FIDECHATGF 240
  241 FGKTGRGTAE AVGGRPDVIN STLGKALGGS MGGYTTGPKP LIDLLRQRSR PYLFSNSLAP 300
  301 SIVGSSIKVF DLLMNDSSFI GSLQTNVSHF RKSMAANGFT ILGNDPTHPI CPVLLGDAKL 360
  361 AATMADELLK MGIYVIGFSF PVVPKGKARI RVQISAAHSK QHIDQLIEAF ATVGKKLNVI 420
  421

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..420] PSI-BLAST 91.0 2-amino-3-ketobutyrate CoA ligase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 5-aminolevulinate synthase activity
    		•  3.15163480353521 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  2.82458180884712 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • N-succinyltransferase activity
    		•  1.81799375593294 bayes_pls_golite062009
  • threonine aldolase activity
    		•  1.80396420390785 bayes_pls_golite062009
  • adenosylmethionine-8-amino-7-oxononanoate transaminase activity
    		•  1.74778109525713 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • glycine C-acetyltransferase activity
    		•  0.935794708043259 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • intramolecular transferase activity, transferring amino groups
    		•  0.659071155545801 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.319452731970428 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.15938456446406 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  0.0450490929307473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle