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Protein Overview: CE35533

General Information:
Name(s) found: CE35533 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00018280 status:Partially_confirmed UniProt:Q20272 protein_id:CCD67900.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cation transport [IEALink to PubMed article]
    Molecular Function: cation transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGQIKFFWL FKNSQTFLFT LRNSEKVSIL NNNFGSRSTF YSLQFLYYVF SHRMSASQKQ  60
   61 KVVKVPTVNL PPQSSSRAPS TLNILKMTNK KEFAEYAIMI IVNLANVALV LIKSVAAYLS 120
  121 SSFSIGTSAI ESFGDVFVSF LLLVQLILDK RVKRSEYPRG RSSESTTNLT ASVVMMTLAF 180
  181 VNFIQSFDAL ITGNLNPEFG TPHIIVVIVN IVVKLFLFFV CLIKRENNQI RVLMRDQLTD 240
  241 VLTNSIALVA VCIAHSYWKE CDFIGAFIIF LLIIRNWAPI VSESWFKLQG IKGDDEINDK 300
  301 ISQIISSNQS MFTVIVGYIT YHVGNKAIVE IYCEVENQQN REEIQSKFSA DEVLAVYLLP 360
  361 VEESKNVHLL SVKQPDVDCS KNAESVELLQ KV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A No confident structure predictions are available.
    2 View Details [80..392] PSI-BLAST 55.30103 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  0.0225298510244101 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.00888573638791978 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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