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Protein Overview: CE35454

General Information:
Name(s) found: CE35454 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00008555 status:Partially_confirmed UniProt:G5ECX1 protein_id:CAA93486.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 639 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHMEQDVNAA LRPAYRHRYL QKGHHHSRNA VVDHQELTEK LNRLTSTSSL GSSLPSLSSL  60
   61 HSNSSIGTMP SAKIGDGSTS SLPMSSAKPM STQTSEPQLP DVPEPNESLH NKTIDEFQKD 120
  121 QEKCDRLKAR KAELEMRLRQ KMQELKDVCV EEGDITGEMP VEINDVVLPG DDFPRLKRRV 180
  181 GTAYSIPDEL IKADKADKMS QLETDVELHR RIVAAASRLA TDKNTNKSVR KKRQKDLQAA 240
  241 RLRLNRLEQG LQQMRHSASK PDISSLTSDS SNSWTASNSS GPMLTMAMTK SCPTTPRGSV 300
  301 PDLRNGLDDE KDEFDENVED RVSRRAPSAI SRHSLSQRYS GVSSSSTSSG SDSMGLGLPP 360
  361 RPTSRKSQQQ QTTPFDDQLD NPMICEIPPP PSSAAAHPLY ENVGYRSTSY RSSYRQAHYP 420
  421 TIQDEHTQRK RAQSAHSIST DNGATGRTST YSVPLNDAAQ KFREYDYDDE EDSTPTMDLP 480
  481 SHLINVRRLT SSISCQAGFA TASLDRRYSK LNGGRLSSGG GGSDDVVRQN VTTRITTFPV 540
  541 ATSAATVILS GKPYSASELP RFQPPPPVAR VTHMPRGSLP PYSSATMGAQ SPAPPPNGKL 600
  601 PTNPQMEALL SYYKQQQQQQ HQQQSRSAPS QQPKTATIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] PSI-BLAST 28.0 Heavy meromyosin subfragment
    2 View Details [307..440] PSI-BLAST 8.045757 Tropomyosin
    3 View Details [441..492] deduced N/A No confident structure predictions are available.
    4 View Details [493..639] MSA 4.092992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle