| Protein: | CE35454 |
| Organism: | Caenorhabditis elegans |
| Length: | 639 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35454.
| Description | E-value | Query Range |
Subject Range |
|
|
252.0 | [0..399] | [637..873] |
|
Region A: Residues: [1-306] |
1 11 21 31 41 51
| | | | | |
1 MHMEQDVNAA LRPAYRHRYL QKGHHHSRNA VVDHQELTEK LNRLTSTSSL GSSLPSLSSL 60
61 HSNSSIGTMP SAKIGDGSTS SLPMSSAKPM STQTSEPQLP DVPEPNESLH NKTIDEFQKD 120
121 QEKCDRLKAR KAELEMRLRQ KMQELKDVCV EEGDITGEMP VEINDVVLPG DDFPRLKRRV 180
181 GTAYSIPDEL IKADKADKMS QLETDVELHR RIVAAASRLA TDKNTNKSVR KKRQKDLQAA 240
241 RLRLNRLEQG LQQMRHSASK PDISSLTSDS SNSWTASNSS GPMLTMAMTK SCPTTPRGSV 300
301 PDLRNG
|
| Detection Method: |  |
| Confidence: | 28.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [307-440] |
1 11 21 31 41 51
| | | | | |
1 LDDEKDEFDE NVEDRVSRRA PSAISRHSLS QRYSGVSSSS TSSGSDSMGL GLPPRPTSRK 60
61 SQQQQTTPFD DQLDNPMICE IPPPPSSAAA HPLYENVGYR STSYRSSYRQ AHYPTIQDEH 120
121 TQRKRAQSAH SIST
|
| Detection Method: | |
| Confidence: | 8.045757 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [441-492] |
1 11 21 31 41 51
| | | | | |
1 DNGATGRTST YSVPLNDAAQ KFREYDYDDE EDSTPTMDLP SHLINVRRLT SS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [493-639] |
1 11 21 31 41 51
| | | | | |
1 ISCQAGFATA SLDRRYSKLN GGRLSSGGGG SDDVVRQNVT TRITTFPVAT SAATVILSGK 60
61 PYSASELPRF QPPPPVARVT HMPRGSLPPY SSATMGAQSP APPPNGKLPT NPQMEALLSY 120
121 YKQQQQQQHQ QQSRSAPSQQ PKTATIV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
