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Protein Overview: CE35381

General Information:
Name(s) found: CE35381 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015472 Uncharacterized integrin beta-like protein C05D9.3 status:Partially_confirmed UniProt:Q9GYK2 protein_id:CCD63144.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: integrin complex [IEALink to PubMed article]
    Biological Process: cell-matrix adhesion [IEALink to PubMed article]
    integrin-mediated signaling pathway [IEALink to PubMed article]
    multicellular organismal development [IEALink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    Molecular Function: receptor activity [IEALink to PubMed article]
    binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRIFFITL LTIVAAQESA DQLCSSFDAQ QSCGQCIKAH AECAWCIDPH SSLTNRCQLK  60
   61 SKFTNETCTP HLVYSPQTAQ VKIQQNLPLE TKQHDGKTIV RQQPQAVSVR LMPSHSATVS 120
  121 FKYLHQTDPS RRSTEPETME IQTSDVKDTP LQLKFFIVCD GELKETKSCR VQNNQIVEFK 180
  181 IEVLVNSCSS TGDITLSVGI LRQRTIAGLY VTTICGCECE KHPEINSRLC HQNGHLVCGQ 240
  241 CVCDQSRGGD KCECPLASHG VSKASELEDK CRFNSSSPVC SASGKCKCGQ CQCNKPTVTG 300
  301 KFCQCDNDSC PLAVNGKVCS GNGVCDCGVC KCEMGWERDD CSCSTASNNC VDNGTPAPEE 360
  361 KDKPESVPEE PEATEKPDDM PSDSDLEKEL DESSSAKEEQ TSSSGVVSRV CVLLTFFLLV 420
  421 LNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] FFAS03 3.3 Structural basis for allostery in integrins and binding of ligand-mimetic therapeutics to the platelet receptor for fibrinogen
    2 View Details [96..423] PSI-BLAST 52.69897 Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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