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Protein Overview: CE35078

General Information:
Name(s) found: CE35078 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00021434 status:Partially_confirmed UniProt:Q9N521 protein_id:CCD73006.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: vitelline membrane formation [IEALink to PubMed article]
    Molecular Function: structural constituent of vitelline membrane [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPMSPNESS LIDFLIAVCS ITFRQMSIQL FIIFFYFLVF PASTIFQFRQ FPPAPVSDKG  60
   61 KNCPDGEFVY GIRVGNDGLE IFCRKFGTSS LSIEMDPLNT DGNIKYCSGS GVIVGLFRTE 120
  121 NGDTHQLCEH TNDAWHGASC SRGFAVCGIK DKRDGGLQTF ETFLKDFLEC CKLPKVLNFQ 180
  181 CKPEFSLNFA AERDNREGPN AVTDSFKLNI SLTTSDGEDE MLTQEERSAV ADSIIYSVQR 240
  241 YGLSETGTTY KMKNVTKILP LIKDAVMNPR QENSQYTIPA KTYTMVIQKV ITCGNYQVSL 300
  301 PERFQKFTSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] PSI-BLAST 28.69897 Vitelline membrane outer protein-I (VMO-I)
    2 View Details [177..310] MSA 1.010966 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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