YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE35078
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPMSPNESS LIDFLIAVCS ITFRQMSIQL FIIFFYFLVF PASTIFQFRQ FPPAPVSDKG  60
   61 KNCPDGEFVY GIRVGNDGLE IFCRKFGTSS LSIEMDPLNT DGNIKYCSGS GVIVGLFRTE 120
  121 NGDTHQLCEH TNDAWHGASC SRGFAVCGIK DKRDGGLQTF ETFLKDFLEC CKLPKVLNFQ 180
  181 CKPEFSLNFA AERDNREGPN AVTDSFKLNI SLTTSDGEDE MLTQEERSAV ADSIIYSVQR 240
  241 YGLSETGTTY KMKNVTKILP LIKDAVMNPR QENSQYTIPA KTYTMVIQKV ITCGNYQVSL 300
  301 PERFQKFTSN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.90
Transmembrane Helix	21	45	0.77
Non-Cytoplasmic	46	310	0.96