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Protein Overview: CE34178

General Information:
Name(s) found: CE34178 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00009306 status:Partially_confirmed UniProt:Q7YXB9 protein_id:CAD92390.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 764 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEEYIMSSK ACIYVLGGAA NTAALFDFDG VYILDGGFAE KNPGFVAHVR DVSAVLLAAP  60
   61 TLGNLGTTSA LLEQGKPLPV FTNTKPFKTA KPGSSGEIAK AIQEANSKIL SVAPPLFNPK 120
  121 YPANIIYQSA AKGVLSLYIL AGDVKDAEVI TKALAGGNEA EVEKAAAEHG TIGVLLWRPA 180
  181 MTDQSVVRVL ISGTSSLSRI QQSLDKAAKS LPFLNVPTVK SKDALSDIPA PAVPRPVAGK 240
  241 PSARPATTTG TATRPTRPAV PAASAPRALT SRAPAGPSRP TTTRNAAPAP RTAVPSRATV 300
  301 LTKTAPASKA PTRAPVPARS APAPPRGAPA KPAANTAKAE PIAQKKTVGK VQGTAPSKPA 360
  361 PAAPASAATS PAPAPEAPRR DPNNVTIVLD DSLSPEDFNQ GSAPMDIVVI PPTPEPPRHE 420
  421 VAQATHPEES IIDAEDLAKE PLIPQAPRDD GTLAECSEEV SKLVEISMDT DNSAEVAADL 480
  481 AKAVGEVTQL SADLQNLGLD EKTDEYVRKL SNQMIEDATL PFTSALASSI VTSNGSETNG 540
  541 HGEQAHAAQN GGIDHQKEIP KHDLMQSRSS VIENGAAVQY EKTDPALDDV LNACAQESEK 600
  601 IDASHPDNLH MPAAPGSAAP AKPVKFARPY YFDVVTVPRN EKLETSVAAD GLQEFISKVR 660
  661 SRNVILASKD ISGEQLQAIL CGKQTWCDSG KFENSFDLIN YFSAHPCNVI PTHSSPMLLD 720
  721 FRQKNEEQFA ANNLQFSIPV EKQRTTVSSD AGAIEYELAR VDLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] FFAS03 1.27 Crystal structure of the complete modular teichioic acid phosphorylcholine esterase Pce (CbpE) from Streptococcus pneumoniae
    2 View Details [163..469] MSA 3.257994 View MSA. No confident structure predictions are available.
    3 View Details [470..552] deduced N/A No confident structure predictions are available.
    4 View Details [553..654] MSA 2.232991 View MSA. No confident structure predictions are available.
    5 View Details [655..764] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.358905464188487 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle