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Protein Overview: cpg-1

General Information:
Name(s) found: cpg-1 / CE33971 [WormBase]
Description(s) found:
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  • WBGene00000465 locus:cpg-1 Chondroitin proteoglycan 1 status:Confirmed UniProt:Q17802 protein_id:CAD91625.1 [WormBase]
  • gi|71981421|ref|NP_001021160.1| Chondroitin ProteoGlycan family member (cpg-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|31043625|emb|CAD91625.1| C. elegans protein C07G2.1b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein C07G2.1b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33971 WBGene00000465 locus:cej-1 status:Confirmed SW:Q17802 protein_id:CAD91625.1 [wormpep150.fasta]
  • 33971 WBGene00000465 locus:cej-1 status:Confirmed SW:Q17802 protein_id:CAD91625.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:cej-1 status:Confirmed SW:Q17802 protein_id:CAD91625.1 [wormpep115.fasta.reversed]
  • CE33971 WBGene00000465 locus:cpg-1 status:Confirmed UniProt:Q17802 protein_id:CAD91625.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33971 WBGene00000465 locus:cpg-1 status:Confirmed UniProt:Q17802 protein_id:CAD91625.1| [wormORF-contam.fasta]
  • CEll Junction protein family member (cej-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33971 WBGene00000465 locus:cpg-1 status:Confirmed UniProt:Q17802 protein_id:CAD91625.1 Chondroitin proteoglycan 1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q17802, Isoform b of Chondroitin proteoglycan 1 OS=Caenorhabditis elegans GN=cpg-1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: chitin metabolic process [IEALink to PubMed article]
    Molecular Function: chitin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLKPVLLAF LVASAYAQYG VAGMYENLPL ETTTLDGSGD GSGADNGFVS GADAVAIDTD  60
   61 CSTKEDGLYA IGGCSPQFLT CSGGISRIMD CPADLIYDPR IVACEYSYNV PQCGGVPQDV 120
  121 TSTQEAIFIC ENGLFFSPEQ ARCAPADQIA ECHQTTVQYY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 14.69897 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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