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Protein Overview: rnh-1.0

General Information:
Name(s) found: rnh-1.0 / CE33659 [WormBase]
Description(s) found:
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  • WBGene00004382 locus:rnh-1.0 status:Confirmed UniProt:Q21024 protein_id:CCD70466.1 [WormBase]
  • gi|71991044|ref|NP_494920.2| RNase H family member (rnh-1.0) [Caenorhabditis elegans] [NCBI NR]
  • gi|29570459|gb|AAO91711.1| Rnase h protein 1.0, isoform a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Rnase h protein 1, isoform a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33659 WBGene00004382 locus:rnh-1 ribonuclease H status:Confirmed TR:Q21024 protein_id:AAO91711.1 [wormpep150.fasta]
  • 33659 WBGene00004382 locus:rnh-1 ribonuclease H status:Confirmed TR:Q21024 protein_id:AAO91711.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:rnh-1 ribonuclease H status:Confirmed TR:Q21024 protein_id:AAO91711.1 [wormpep115.fasta.reversed]
  • CE33659 WBGene00004382 locus:rnh-1.0 ribonuclease H status:Confirmed UniProt:Q21024_CAEEL protein_id:AAO91711.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33659 WBGene00004382 locus:rnh-1.0 ribonuclease H status:Confirmed UniProt:Q21024_CAEEL protein_id:AAO91711.1| [wormORF-contam.fasta]
  • CE33659 WBGene00004382 locus:rnh-1.0 ribonuclease H status:Confirmed TR:Q21024 protein_id:AAO91711.1 [wormpep160-contam.fasta]
  • Rnase h protein 1.0, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • RNase H family member (rnh-1.0) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33659 WBGene00004382 locus:rnh-1.0 ribonuclease H status:Confirmed UniProt:Q21024 protein_id:AAO91711.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33659 WBGene00004382 locus:rnh-1.0 ribonuclease H status:Confirmed UniProt:Q21024 protein_id:CCD70466.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE33659 WBGene00004382 locus:rnh-1.0 status:Confirmed UniProt:Q21024 protein_id:CCD70466.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q86MG7, RNase H OS=Caenorhabditis elegans GN=rnh-1.0 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 155 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ribonuclease H activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFYGVAHG FKRGVFTEWA EAKKQIDKFP QPVYKKFETE EEAQKYVDDR KPKKVESTFP  60
   61 ESTHDTYYAV ARGHSVGVFT NYNEVKEHIK NYPQPLHKKW STLEEAIAYF HKYYEGKEEA 120
  121 KKAENEEKPD KSEKRESKRK ADQEESVEKK KKKKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 4.69897 Bacillus halodurans RNase H catalytic domain mutant D192N in complex with 12-mer RNA/DNA hybrid


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle