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View Structure Prediction Details

Protein: rnh-1.0
Organism: Caenorhabditis elegans
Length: 155 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rnh-1.0.

Description E-value Query
Range
Subject
Range
gi|116200977, gi... - gi|88176891|gb|EAQ84359.1| hypothetical protein CHGG_08373 [Chaetomium globosum CBS 148.51], gi|1162...
136.0 [0..3] [150..15]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFYGVAHG FKRGVFTEWA EAKKQIDKFP QPVYKKFETE EEAQKYVDDR KPKKVESTFP  60
   61 ESTHDTYYAV ARGHSVGVFT NYNEVKEHIK NYPQPLHKKW STLEEAIAYF HKYYEGKEEA 120
  121 KKAENEEKPD KSEKRESKRK ADQEESVEKK KKKKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 1zblA
Description: Bacillus halodurans RNase H catalytic domain mutant D192N in complex with 12-mer RNA/DNA hybrid
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle