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Protein Overview: atf-7

General Information:
Name(s) found: atf-7 / CE33598 [WormBase]
Description(s) found:
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  • WBGene00000223 locus:atf-7 status:Confirmed UniProt:Q86MD3 protein_id:CAD88215.1 [WormBase]
  • gi|71981443|ref|NP_001021161.1| ATF (cAMP-dependent transciption factor) family member (atf-7) [Caenorhabditis elegans] [NCBI NR]
  • gi|29603335|emb|CAD88215.1| C. elegans protein C07G2.2c, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein C07G2.2c [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33598 WBGene00000223 locus:atf-7 status:Confirmed TR:Q86MD3 protein_id:CAD88215.1 [wormpep150.fasta]
  • 33598 WBGene00000223 locus:atf-7 status:Confirmed TR:Q86MD3 protein_id:CAD88215.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Confirmed TR:Q86MD3 protein_id:CAD88215.1 [wormpep115.fasta.reversed]
  • CE33598 WBGene00000223 locus:atf-7 status:Confirmed UniProt:Q86MD3_CAEEL protein_id:CAD88215.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33598 WBGene00000223 locus:atf-7 status:Confirmed UniProt:Q86MD3_CAEEL protein_id:CAD88215.1| [wormORF-contam.fasta]
  • ATF (cAMP-dependent transciption factor) family member (atf-7) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33598 WBGene00000223 locus:atf-7 status:Confirmed UniProt:Q86MD3 protein_id:CAD88215.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • ATF (CAMP-dependent transcription factor) family OS=Caenorhabditis elegans GN=atf-7 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 509 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTMMTSSA SPPESGELDV ASAVASAAAA LISPMVMPTS MTNGKDMTKT SQILNEYFNM  60
   61 MVGKRVQLMG DTTSPFSLDT PNPKLMFTPL DLPTTAELMQ RCLAVNPFEA KFREANQKIS 120
  121 SGSMQPNTSG ANQSLEALEA NGGSQFSGSN AGTMSDLLLK IPQASLQHSP GIFSNMLLNA 180
  181 GDSEGTTREN LKTADISKLL SVAGDFSAQA PRTADVLNAV LDMHSDRLHT INYLNNKPDF 240
  241 SALLRSPSSS APNSASVLTN AMAIPSTSGA PFPGTTLLVP PKTVSSYHSP LGASSQPPST 300
  301 QKSPADGSWD HINGEKQIKK EIPYFNDDAM MLMERSNMSS SGSDQDQSAD MSNAGSTAST 360
  361 STGNPVGRPQ NGTPGRGRGR GRSTTADMQP DERRNTILER NKAAAVRYRK RKKEEHDDMM 420
  421 GRVQAMEAEK NQLLAIQTQN QVLRRELERV TALLTERESR CVCLKGVPMS DEQHADHHHR 480
  481 NTNGMYSGSD MLNGLGQING MQLKLPKLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] deduced N/A No confident structure predictions are available.
    2 View Details [77..300] MSA 4.172995 View MSA. No confident structure predictions are available.
    3 View Details [301..383] deduced N/A No confident structure predictions are available.
    4 View Details [384..509] PSI-BLAST 15.30103 Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.51

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle