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Protein Overview: CE33576

General Information:
Name(s) found: CE33576 [WormBase]
Description(s) found:
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  • WBGene00016918 status:Confirmed UniProt:H2KZF8 protein_id:CCD68036.1 [WormBase]
  • gi|71985498|ref|NP_001023099.1| hypothetical protein C54E4.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|28894820|gb|AAO61425.1| Hypothetical protein C54E4.2b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein C54E4.2b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33576 WBGene00016918 status:Confirmed TR:Q86GV1 protein_id:AAO61425.1 [wormpep150.fasta]
  • 33576 WBGene00016918 status:Confirmed TR:Q86GV1 protein_id:AAO61425.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Confirmed TR:Q86GV1 protein_id:AAO61425.1 [wormpep115.fasta.reversed]
  • CE33576 WBGene00016918 status:Confirmed UniProt:Q86GV1_CAEEL protein_id:AAO61425.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33576 WBGene00016918 status:Confirmed UniProt:Q86GV1_CAEEL protein_id:AAO61425.1| [wormORF-contam.fasta]
  • C54E4.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • hypothetical protein C54E4.2 [Caenorhabditis elegans] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • CE33576 WBGene00016918 status:Confirmed UniProt:Q86GV1 protein_id:AAO61425.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33576 WBGene00016918 status:Confirmed UniProt:H2KZF8 protein_id:CCD68036.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE33576 WBGene00016918 locus:test-1 status:Confirmed UniProt:H2KZF8 protein_id:CCD68036.1 [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Vertebrate proteoglycan TESTican homolog OS=Caenorhabditis elegans GN=test-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: locomotion [IMP]
    Molecular Function: calcium ion binding [IEALink to PubMed article]
    insulin-like growth factor binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIVAILAC HVAISAAYIS SEDLEKPSSA DKPVHEKNHC TRSELMRMGG RLVKWFKDVH  60
   61 AQESGADHTL KLHSVPCRVE VGWMFNQWDG NQDGKLSKVG FVVSVEAELR PIERGGNEAC 120
  121 VEEFIDMCDD MVVDGSISVD EWCDCFTFSD DLRHEPPCHK AKHDVDPHLL GVFLPRCDLE 180
  181 GFYKPEQCHD GNCWCVDRYG REFDKSRVQN TLPDCGQYAS DMTEEDIAFL RERL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 25.0 C-terminal (EC) domain of BM-40/SPARC/osteonectin; Domain of BM-40/SPARC/osteonectin
    2 View Details [155..234] PSI-BLAST 13.522879 No description for 2h7tA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle