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View Structure Prediction Details

Protein: CE33576
Organism: Caenorhabditis elegans
Length: 234 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33576.

Description E-value Query
Range
Subject
Range
CE20611 - status:Confirmed UniProt:O44466 protein_id:AAK29794.1
232.0 [0..1] [234..1]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIVAILAC HVAISAAYIS SEDLEKPSSA DKPVHEKNHC TRSELMRMGG RLVKWFKDVH  60
   61 AQESGADHTL KLHSVPCRVE VGWMFNQWDG NQDGKLSKVG FVVSVEAELR PIERGGNEAC 120
  121 VEEFIDMCDD MVVDGSISVD EWCDCFTFSD DLRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 1nubA
Description: C-terminal (EC) domain of BM-40/SPARC/osteonectin; Domain of BM-40/SPARC/osteonectin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [155-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPPCHKAKHD VDPHLLGVFL PRCDLEGFYK PEQCHDGNCW CVDRYGREFD KSRVQNTLPD  60
   61 CGQYASDMTE EDIAFLRERL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.522879
Match: 2h7tA
Description: No description for 2h7tA was found.

YRC Informatics Platform - Version 3.0
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