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Protein Overview: CE33575

General Information:
Name(s) found: CE33575 [WormBase]
Description(s) found:
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  • WBGene00016907 status:Confirmed UniProt:Q86GU9 protein_id:CCD67949.1 [WormBase]
  • gi|71982363|ref|NP_001021060.1| hypothetical protein C53H9.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|28894823|gb|AAO61427.1| Hypothetical protein C53H9.2c [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein C53H9.2c [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33575 WBGene00016907 status:Confirmed TR:Q86GU9 protein_id:AAO61427.1 [wormpep150.fasta]
  • 33575 WBGene00016907 status:Confirmed TR:Q86GU9 protein_id:AAO61427.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Confirmed TR:Q86GU9 protein_id:AAO61427.1 [wormpep115.fasta.reversed]
  • CE33575 WBGene00016907 status:Confirmed UniProt:Q86GU9_CAEEL protein_id:AAO61427.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33575 WBGene00016907 status:Confirmed UniProt:Q86GU9_CAEEL protein_id:AAO61427.1| [wormORF-contam.fasta]
  • C53H9.2c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • hypothetical protein C53H9.2 [Caenorhabditis elegans] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • CE33575 WBGene00016907 status:Confirmed UniProt:Q86GU9 protein_id:AAO61427.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33575 WBGene00016907 status:Confirmed UniProt:Q86GU9 protein_id:CCD67949.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    establishment of nucleus localization [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRELWRVVE KSDIIVQIVD ARNPLLFRSK DLDDYVKEVD PAKQILLLVN KADLLKPEQQ  60
   61 ASWREYFEKE NIKVIFWSAI DEVLDPIDED AVETSNPSTS THMFVTNKDE LIAKFKELGH 120
  121 VSDEPSAKPV MVGMVGYPNV GKSSTINKLA GGKKVSVSAT PGKTRHFQTI HIDSQLCLCD 180
  181 CPGLVMPSFS FGRSEMFLNG ILPVDQMRDH FGPTSLLLSR VPVHVIEADV QGCCQWKIDL 240
  241 GSRTSRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 33.0 Probable GTPase YlqF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle