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View Structure Prediction Details

Protein: CE33575
Organism: Caenorhabditis elegans
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33575.

Description E-value Query
Range
Subject
Range
CE08963 - status:Confirmed UniProt:Q8WQH3 protein_id:AAL65781.1
179.0 [0..1] [228..1]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRELWRVVE KSDIIVQIVD ARNPLLFRSK DLDDYVKEVD PAKQILLLVN KADLLKPEQQ  60
   61 ASWREYFEKE NIKVIFWSAI DEVLDPIDED AVETSNPSTS THMFVTNKDE LIAKFKELGH 120
  121 VSDEPSAKPV MVGMVGYPNV GKSSTINKLA GGKKVSVSAT PGKTRHFQTI HIDSQLCLCD 180
  181 CPGLVMPSFS FGRSEMFLNG ILPVDQMRDH FGPTSLLLSR VPVHVIEADV QGCCQWKIDL 240
  241 GSRTSRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 1pujA
Description: Probable GTPase YlqF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle