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Protein Overview: mab-20

General Information:
Name(s) found: mab-20 / CE33246 [WormBase]
Description(s) found:
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  • WBGene00003111 locus:mab-20 Semaphorin-2A status:Confirmed UniProt:Q95XP4 protein_id:CCD67975.1 [WormBase]
  • gi|71996335|ref|NP_001021820.1| Male ABnormal family member (mab-20) [Caenorhabditis elegans] [NCBI NR]
  • gi|27671898|gb|AAO21421.1| Male abnormal protein 20, isoform b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Male abnormal protein 20, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33246 WBGene00003111 locus:mab-20 status:Confirmed TR:Q86LT8 protein_id:AAO21421.1 [wormpep150.fasta]
  • 33246 WBGene00003111 locus:mab-20 status:Confirmed TR:Q86LT8 protein_id:AAO21421.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:mab-20 status:Partially_confirmed TR:Q86LT8 protein_id:AAO21421.1 [wormpep115.fasta.reversed]
  • CE33246 WBGene00003111 locus:mab-20 status:Confirmed UniProt:SEM2A_CAEEL protein_id:AAO21421.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33246 WBGene00003111 locus:mab-20 status:Confirmed UniProt:SEM2A_CAEEL protein_id:AAO21421.1| [wormORF-contam.fasta]
  • Male ABnormal family member (mab-20) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33246 WBGene00003111 locus:mab-20 status:Confirmed SW:Q95XP4 protein_id:AAO21421.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33246 WBGene00003111 locus:mab-20 status:Confirmed UniProt:Q95XP4 protein_id:AAO21421.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE33246 WBGene00003111 locus:mab-20 status:Confirmed UniProt:Q95XP4 protein_id:CCD67975.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE33246 WBGene00003111 locus:mab-20 status:Confirmed UniProt:Q95XP4 protein_id:CCD67975.1 Semaphorin-2A [wormpep246-ecoli-contam.fasta]
  • Isoform of Q95XP4, Isoform b of Semaphorin-2A OS=Caenorhabditis elegans GN=mab-20 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 174 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: multicellular organismal development [IEALink to PubMed article]
    tail tip morphogenesis [IGILink to PubMed article][IMPLink to PubMed article]
    regulation of cell adhesion [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNFLVFSVI FIAYNSCEAA NIQADNTFAD PNIGEFRELL IDPKAGALFV GSEGAIFRLW  60
   61 AYNINDTGEN VFAKKQLVLS ESEESECRST ASDERLCRPS TRFLAFTNNL DSIYVCSSVG 120
  121 MRPEIRVLDS LSLRDQQEPR TEIGICVVDP TFNFTAVVVD SGNPEGKQVR SIDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] PSI-BLAST 39.522879 The ligand-binding face of the semaphorins revealed by the high resolution crystal structure of SEMA4D


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle