YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE32917

General Information:
Name(s) found: CE32917 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00011166 locus:chil-22 status:Partially_confirmed UniProt:Q21866 protein_id:CAA93870.2 [WormBase]
  • gi|32564165|ref|NP_496031.2| hypothetical protein R09D1.10 [Caenorhabditis elegans] [NCBI NR]
  • gi|26985826|emb|CAA93870.2| C. elegans protein R09D1.10, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32917 WBGene00011166 chitinase status:Partially_confirmed TR:Q21866 protein_id:CAA93870.2 [wormpep150.fasta]
  • 32917 WBGene00011166 chitinase status:Partially_confirmed TR:Q21866 protein_id:CAA93870.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • glycoside hydrolase, family 18 (51.9 kD) (2J756) [Caenorhabditis elegans]gi|26985826|emb|CAA93870.2| Hypothetical protein R09D1.10 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • chitinase status:Partially_confirmed TR:Q21866 protein_id:CAA93870.2 [wormpep115.fasta.reversed]
  • CE32917 WBGene00011166 chitinase status:Partially_confirmed UniProt:Q21866_CAEEL protein_id:CAA93870.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32917 WBGene00011166 chitinase status:Partially_confirmed UniProt:Q21866_CAEEL protein_id:CAA93870.2| [wormORF-contam.fasta]
  • R09D1.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein R09D1.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32917 WBGene00011166 chitinase status:Partially_confirmed UniProt:Q21866 protein_id:CAA93870.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32917 WBGene00011166 locus:chil-22 status:Partially_confirmed UniProt:Q21866 protein_id:CAA93870.2 [wormpep246-ecoli-contam.fasta]
  • CHItinase-Like OS=Caenorhabditis elegans GN=chil-22 PE=3 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYQSNPNNP LLKEPKFKQK NDKPVRNDAA FYNAWKYVFL VVIFSGVLAF GICFLLRNYG  60
   61 VGRENREFQT MSEEDGEICD KKVIGYFSES HTSEITINHI SKLTHAVFAF VIMKSDGTVM 120
  121 FRDKLAQERF LKIRDIANQA SPKLKMLISI GGPANSDNFL PVISSPDRKK IFINSIVSFL 180
  181 KKYDIDGVDL FWKWPRLEDK YYYSRFISML KERFQMEEKN YILSIIIPPC GFGGWNNKFD 240
  241 IENIVAVADF INIYSMDYYG PWKNPYGNPT GPISPIYNGA QGREAYNVHS SALTYSCKVK 300
  301 QSKKFNIVIP FFARLWKNVE KPIQHPGREV YRNVHLVHGS AVGESFMSRK SVLEKGYKLN 360
  361 SYSYDELSRS AFIYNSTTKE YLTFETEKSI EAKVNYVKDR ALAGVWIWFV DLDDEENSLI 420
  421 NAVNFTGLCS SGDTLKFDCH QKKSKSFAYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A No confident structure predictions are available.
    2 View Details [80..450] PSI-BLAST 93.0 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • growth factor activity
    		•  1.56098048939473 bayes_pls_golite062009
  • binding
    		•  1.07141933768756 bayes_pls_golite062009
  • receptor binding
    		•  0.72156252484763 bayes_pls_golite062009
  • protein binding
    		•  0.41522498233974 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.0570314275508301 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle