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Protein Overview: stam-1

General Information:
Name(s) found: stam-1 / CE32816 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004109 locus:stam-1 Signal transducing adapter molecule 1 status:Confirmed UniProt:O01498 protein_id:CCD66688.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: early endosome [IDALink to PubMed article]
    Biological Process: intracellular protein transport [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAYEDLLGK ITAPTITVEN WEGILAFCDM INNDFEGSKT GIKSLRKRLN NRDPHVVLLA  60
   61 ISVLDSCWAN CEERFRKEVS SAQFINELKA LCTSSQRQVA EKMRLTVQKW VDTECKTEQS 120
  121 LSLIVTLHKN LVADGYSFVV DDPKSKTKAI DAKFANDPNY VGSAQEEEAI AKAIAASLAD 180
  181 AEKQEKAKKS TSTMYPSAKA SSPAVQTNSN IPEKNVRALY DFEAAESNEL SFVAGDIITI 240
  241 TDESNPHWWT GRIGTQQGLF PSSFVTNQLD DLKSKETDSS QKAPEVVASI NEAILVRCLQ 300
  301 VLHECDPTGE RQDPEDLAQL EAASYAQGNL IDAHLASIDR QSNSLAQIDV AIRDVLALYD 360
  361 DAIQKGGFQH QSQGMYQQPM QQYNYQQPVS FYSEKNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 30.522879 Tom1 protein
    2 View Details [156..397] PSI-BLAST 27.09691 No description for 2h8hA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.667266872981791 bayes_pls_golite062009
  • protein binding
    		•  0.398650182817372 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.872285616053859 bayes_pls_golite062009
  • protein binding
    		•  0.778250743091692 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle