| Protein: | stam-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 397 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stam-1.
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..2] | [392..7] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MSAYEDLLGK ITAPTITVEN WEGILAFCDM INNDFEGSKT GIKSLRKRLN NRDPHVVLLA 60
61 ISVLDSCWAN CEERFRKEVS SAQFINELKA LCTSSQRQVA EKMRLTVQKW VDTECKTEQS 120
121 LSLIVTLHKN LVADGYSFVV DDPKSKTKAI DAKFA
|
| Detection Method: |  |
| Confidence: | 30.522879 |
| Match: | 1elkA |
| Description: | Tom1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.667266872981791 | bayes_pls_golite062009 |
| protein binding | 0.398650182817372 | bayes_pls_golite062009 |
|
Region A: Residues: [156-397] |
1 11 21 31 41 51
| | | | | |
1 NDPNYVGSAQ EEEAIAKAIA ASLADAEKQE KAKKSTSTMY PSAKASSPAV QTNSNIPEKN 60
61 VRALYDFEAA ESNELSFVAG DIITITDESN PHWWTGRIGT QQGLFPSSFV TNQLDDLKSK 120
121 ETDSSQKAPE VVASINEAIL VRCLQVLHEC DPTGERQDPE DLAQLEAASY AQGNLIDAHL 180
181 ASIDRQSNSL AQIDVAIRDV LALYDDAIQK GGFQHQSQGM YQQPMQQYNY QQPVSFYSEK 240
241 NI
|
| Detection Method: | |
| Confidence: | 27.09691 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
| Term | Confidence | Notes |
| binding | 0.872285616053859 | bayes_pls_golite062009 |
| protein binding | 0.778250743091692 | bayes_pls_golite062009 |
