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Protein Overview: pme-4

General Information:
Name(s) found: pme-4 / CE32685 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00004052 locus:pme-4 Poly(ADP-ribose) glycohydrolase pme-4 status:Confirmed UniProt:Q9N5L4 protein_id:CCD68980.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 485 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    Molecular Function: poly(ADP-ribose) glycohydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHENLMKYL EEFRSIRFQP DFQKVDAERN VRYCEITDFP ISNISFELLE TGVSQQWRNC  60
   61 DQNLFNEYLK TYKNGGYSQF EDLLFKIWGY SEEKERFDLP ALKSFYRKMS EIVGEDEVLE 120
  121 KLARLVRITK SACEVLPEKI YRLVGDIESA TFSHIQCASL IAWMFFSDTP RLSFIIILQK 180
  181 TTCVAVEKLK FLFTYFDKMS IDPPIGAVSF RKMRITHKQY LENWKLRETN LLPDVQVFDK 240
  241 MSIEETALCT QIDFANKRLG GGVLKGGAVQ EEIRFMMCPE MMVAILLNDV TQDLEAISIV 300
  301 GAYVFSSYTG YSNTLKWAKI TPKHSAQNNN SFRDQFGRLQ TETVAIDAVR NAGTPLECLL 360
  361 NQLTTEKLTR EVRKAAIGFL SAGDGFSKIP VVSGWWGCGA FRGNKPLKFL IQVIACGISD 420
  421 RPLQFCTFGD TELAKKCEEM MTLFRNNNVR TGQLFLIINS IGPPLNYSEQ YVFDAIRAKI 480
  481 NSTKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..48] MSA 1.019991 View MSA. No confident structure predictions are available.
    2 View Details [49..120] MSA 2.040992 View MSA. No confident structure predictions are available.
    3 View Details [121..311] MSA 1.061959 View MSA. No confident structure predictions are available.
    4 View Details [312..389] deduced N/A No confident structure predictions are available.
    5 View Details [390..485] MSA 11.071994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle