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Protein Overview: wsp-1

General Information:
Name(s) found: wsp-1 / CE32572 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00006957 locus:wsp-1 status:Confirmed UniProt:Q17795 protein_id:CCD61396.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: cell cortex [IDALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVYPPTPTM SMMNGGVDRK RAKRPPNVGS KELNSQENEM LFALVGSEAV CLTAAVVQLL  60
   61 KSDRGAWRVD LPHGVISLVK DYAQRAYFLR IFDILEERIV WDFKLYKAFR AQSFPQCRKL 120
  121 LAFEQMENGE DGVVIGLNFF SEYEAAEFKE HLERRHAQER KSTSTTRPAH PGMPIVVSSG 180
  181 IGSTPTRQFE ITQAYGGTIR GPPMAIGGGQ GITQMGTMAA APQSHTHTDG NASSSGSWFR 240
  241 KDKNKKKDKK SKIKKEDISN PTNFQHKAHV GWNQDSGFSN TVYDDDMDEA TKNILKAAGL 300
  301 ESNNLNEDDK KFVKKFIAKN YDKYVSVGSL DPSQISSPLP PPIQQHPQMN QSWNQTPVRQ 360
  361 YKPSFPSSAP IGSGASSYST PAAPPPPTRV ESHGLAPARP PPPPPSSGTR GIAPSRPLPQ 420
  421 APNYGTPENR PHAVPPPPPP PPPQSFGMAP ISSAAPPPPP PPPPMGLPAV GAGAPPPPPP 480
  481 PPPSGAGGPA SVLAKLPPAQ DGRSNLLAEI QAGKQLRSVQ QTADSPKSAG GDARGDVMAQ 540
  541 IRQGAQLKHV DAAAEQERRK STTSGAAGMG GLAGALAKAL EERRMNMGID DTSDDDDDED 600
  601 DKNEWSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] PSI-BLAST 56.221849 Actin regulatory protein WASP
    2 View Details [166..235] deduced N/A No confident structure predictions are available.
    3 View Details [236..349] FFAS03 2.03 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
    4 View Details [350..502] deduced N/A No confident structure predictions are available.
    5 View Details [503..607] MSA 3.202995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.597587183571285 bayes_pls_golite062009
  • protein binding
    		•  0.29116370406325 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle