| Protein: | wsp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wsp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..12] | [333..1] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MSVYPPTPTM SMMNGGVDRK RAKRPPNVGS KELNSQENEM LFALVGSEAV CLTAAVVQLL 60
61 KSDRGAWRVD LPHGVISLVK DYAQRAYFLR IFDILEERIV WDFKLYKAFR AQSFPQCRKL 120
121 LAFEQMENGE DGVVIGLNFF SEYEAAEFKE HLERRHAQER KSTST
|
| Detection Method: |  |
| Confidence: | 56.221849 |
| Match: | 1mkeA |
| Description: | Actin regulatory protein WASP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.597587183571285 | bayes_pls_golite062009 |
| protein binding | 0.29116370406325 | bayes_pls_golite062009 |
|
Region A: Residues: [166-235] |
1 11 21 31 41 51
| | | | | |
1 TRPAHPGMPI VVSSGIGSTP TRQFEITQAY GGTIRGPPMA IGGGQGITQM GTMAAAPQSH 60
61 THTDGNASSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [236-349] |
1 11 21 31 41 51
| | | | | |
1 GSWFRKDKNK KKDKKSKIKK EDISNPTNFQ HKAHVGWNQD SGFSNTVYDD DMDEATKNIL 60
61 KAAGLESNNL NEDDKKFVKK FIAKNYDKYV SVGSLDPSQI SSPLPPPIQQ HPQM
|
| Detection Method: | |
| Confidence: | 2.03 |
| Match: | 1ej5A |
| Description: | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [350-502] |
1 11 21 31 41 51
| | | | | |
1 NQSWNQTPVR QYKPSFPSSA PIGSGASSYS TPAAPPPPTR VESHGLAPAR PPPPPPSSGT 60
61 RGIAPSRPLP QAPNYGTPEN RPHAVPPPPP PPPPQSFGMA PISSAAPPPP PPPPPMGLPA 120
121 VGAGAPPPPP PPPPSGAGGP ASVLAKLPPA QDG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [503-607] |
1 11 21 31 41 51
| | | | | |
1 RSNLLAEIQA GKQLRSVQQT ADSPKSAGGD ARGDVMAQIR QGAQLKHVDA AAEQERRKST 60
61 TSGAAGMGGL AGALAKALEE RRMNMGIDDT SDDDDDEDDK NEWSD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
