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Protein Overview: CE32375

General Information:
Name(s) found: CE32375 [WormBase]
Description(s) found:
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  • WBGene00008819 locus:shw-1 status:Confirmed UniProt:Q19464 protein_id:CAA91092.2 [WormBase]
  • gi|32564076|ref|NP_495752.2| hypothetical protein F14F11.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|25004927|emb|CAA91092.2| C. elegans protein F14F11.1a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32375 WBGene00008819 potassium channel status:Partially_confirmed TR:Q19464 protein_id:CAA91092.2 [wormpep150.fasta]
  • 32375 WBGene00008819 potassium channel status:Partially_confirmed TR:Q19464 protein_id:CAA91092.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • k+ channel tetramerisation and ion transport protein family member (2I598) [Caenorhabditis elegans]gi|25004927|emb|CAA91092.2| Hypothetical protein F14F11.1a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • potassium channel status:Partially_confirmed TR:Q19464 protein_id:CAA91092.2 [wormpep115.fasta.reversed]
  • CE32375 WBGene00008819 potassium channel status:Partially_confirmed UniProt:Q19464_CAEEL protein_id:CAA91092.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32375 WBGene00008819 potassium channel status:Partially_confirmed UniProt:Q19464_CAEEL protein_id:CAA91092.2| [wormORF-contam.fasta]
  • F14F11.1a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F14F11.1a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32375 WBGene00008819 potassium channel status:Partially_confirmed UniProt:Q19464 protein_id:CAA91092.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32375 WBGene00008819 locus:shw-1 potassium channel status:Confirmed UniProt:Q19464 protein_id:CAA91092.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE32375 WBGene00008819 locus:shw-1 status:Confirmed UniProt:Q19464 protein_id:CAA91092.2 [wormpep246-ecoli-contam.fasta]
  • Isoform of G5EC00, SHaW family of potassium channels OS=Caenorhabditis elegans GN=shw-1 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 493 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    ion channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTEHRVILN VGGIRHETYS HVLKKIPATR LSRLTPNLAN YDPVLNEYFF DRHPGVFSMI  60
   61 LNYYRTGKLH YPTNVCGPLF EEELEFWGLD ANQVEPCCWM TYTQHRDTQD TLAVIESLDL 120
  121 DGDPPTQEEI AKKFGWEDDY YTGNMSQWQR LKPRVWALFD EPWSSKYARV ISSLSVAFIL 180
  181 ASTCSFILKT DPSFQIPDID VFYSLRVVDE GGFKNYHKTI GTDKPVTSPH PNFFYVDLIC 240
  241 NIWFTIELLI RSLFCPSFHK FVRSPLTIID VISTGAFFFE SLLHAILIQT GSLVTLDFLS 300
  301 MICVLRLFKL TQHFSGLKIL IQTFKASAQE LFLLVFFVIL AIVIFAALVY YAERSQLNKD 360
  361 NQFTSIPLGL WWSLVTISTV GFGDMVPKTY LGMLVGSLCA LMGVLTIALP VPVIVSNFSN 420
  421 LYSHSQARAK LPKKRRRVLQ AHEVKPALLG VKQHHGKHRK KSSSATFNQP PANFKNANGG 480
  481 PSMHDNSASK LMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..493] PSI-BLAST 78.154902 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle