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Protein Overview: dcp-66

General Information:
Name(s) found: dcp-66 / CE32312 [WormBase]
Description(s) found:
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  • WBGene00000938 locus:dcp-66 status:Partially_confirmed UniProt:Q8I0T2 protein_id:CAD56589.1 [WormBase]
  • gi|32564005|ref|NP_871831.1| Deacetylase Complex Protein family member (dcp-66) [Caenorhabditis elegans] [NCBI NR]
  • gi|25004980|emb|CAD56589.1| C. elegans protein C26C6.5b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|25004900|emb|CAD56560.1| C. elegans protein C26C6.5b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32312 WBGene00000938 locus:dcp-66 status:Partially_confirmed TR:Q8I0T2 protein_id:CAD56589.1 [wormpep150.fasta]
  • 32312 WBGene00000938 locus:dcp-66 status:Predicted TR:Q8I0T2 protein_id:CAD56589.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein, with 2 coiled coil-4 domains, of bilaterial origin (75.2 kD) (1I114) [Caenorhabditis elegans]gi|25004980|emb|CAD56589.1| Hypothetical protein C26C6.5b [Caenorhabditis elegans]gi|25004900|emb|CAD56560.1| Hypothetical protein C26 [nrdb_11152004_Chlamydomonas]
  • CE32312 WBGene00000938 locus:dcp-66 status:Predicted TR:Q8I0T2 protein_id:CAD56589.1 [wormpep132.fasta]
  • 32312 WBGene00000938 locus:dcp-66 status:Partially_confirmed TR:Q8I0T2 protein_id:CAD56589.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • locus:dcp-66 status:Partially_confirmed TR:Q8I0T2 protein_id:CAD56589.1 [wormpep115.fasta.reversed]
  • CE32312 WBGene00000938 locus:dcp-66 status:Partially_confirmed UniProt:Q8I0T2_CAEEL protein_id:CAD56589.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32312 WBGene00000938 locus:dcp-66 status:Partially_confirmed UniProt:Q8I0T2_CAEEL protein_id:CAD56589.1| [wormORF-contam.fasta]
  • Hypothetical protein C26C6.5b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Deacetylase Complex Protein family member (dcp-66) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32312 WBGene00000938 locus:dcp-66 status:Partially_confirmed UniProt:Q8I0T2 protein_id:CAD56589.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 684 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of vulval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of vulval development [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVQQVPSS PMNGIPEKNG NGLSIEESAS TAVAALAHIQ NGAVLFHGTP TKDLNGASTS  60
   61 IDTDDLQLSP SDLRRRSTRA SALKAQEKIK LKDDIVQGPQ KRANDDDDME DEELGDEINE 120
  121 QSAPKKRRLE NGKEFDQTCF RFGLRANNEG EVYAMTDESE NSSIHESEME VVRYHYEKMK 180
  181 NKEPDEEQLR ERLNMRREAE NQLREEEAKL LVLRKMKDSQ TRAITKLAAE TKAADLAEAT 240
  241 SAAYKPAVAT NGKSVTNGKN SMIESNNKTM NGLKNLSIPQ QLELLQKLSS QSPAAKQAYI 300
  301 MAKKNPAQTT QLFQQLITIN NQNLQKQKEL SAAETNASAS ASPAVQQSQQ AQQPQQAQIT 360
  361 QSKLLNQQTP AQRIQAARLA FRAQADKQLT TIPTQKSQPH DITFLPNPNA SAFLALHGLD 420
  421 LVVQHVLKDR SNETPYAGPS YECEECKTEC AHTWKAIGST QDDLHLYCEN CVRSAQKRKN 480
  481 RTDQTALLKR AFQKITAQEK LLQEFEKKIA EGQLEQYAEA KAAAPATSQT IPTSSTATVS 540
  541 SIPLVPRLPQ IPSSTGSSTP TQAVKTSTPI HSTPKSSSSS AKKTAAQLQQ QSMQGMNQLF 600
  601 STAMLRNNPQ MQQMLQMYQA LAMGGGAANM ANNQMAMLFQ AQAMQAAQAQ VARAQAAKAQ 660
  661 AAQAQAAQLK PRHRQIERRI NNQC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..221] deduced N/A No confident structure predictions are available.
    2 View Details [222..447] PSI-BLAST 5.045757 Sec24
    3 View Details [448..684] MSA 2.248996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle