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Protein Overview: lst-4

General Information:
Name(s) found: lst-4 / CE32246 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00003086 locus:lst-4 Sorting nexin lst-4 status:Confirmed UniProt:Q8I4E2 protein_id:CAD56253.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 566 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell communication [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    phosphoinositide binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVKAEYDF QSQPNTGELS ISAGEVLTVI RENIDGGWIE GRNVRGSVGL FPESYVTPYQ  60
   61 ASRPPPVLPP PLPPTSSGPP AASSRPFDDW GGASEVAAPP SYGAQHHHQP TPSVPEVTRS 120
  121 SYPSQNDDFD DEWTDEDDEQ EPTRPNVQSS IGSNSRRDLS RSHSEHGGPD RGSNKVNKNI 180
  181 NRFSNFVKSG VEAYVIGESK TTSQISERHE VVMNNGIIQW KPIQQYYTCI VDKPKKESKL 240
  241 KGLKSFIAYS ITSSLTNIQR QVSRRYKHFD WLHEQLSAKY VLIPIPPLPE KQVAGRYEED 300
  301 LIDHRKHILQ LWVNKICRHP VLSQSEVWLH FISCTDEKDW KNGKRRAEKD EYIGGAFLNC 360
  361 ITVPHQPLDP NNVDMQVERF QRSVKTSEEA MRVMQERMNM FQKVFAGPVK QNWQKMGSAF 420
  421 KTLQQSFEID ETVASRRLTE ALAYTASEYH EIGQVFDAHT KNDMEPVLEN LYSYKGTVQN 480
  481 VPDIIQVHKQ AVQKFRDSEG RLSSAEAEKM KQRIDAMSYT VIAEVQHQTA EKVEDMKSTM 540
  541 GTYLKKQAMF YQEVATKLTS LAARYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 20.69897 Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck
    2 View Details [366..566] FFAS03 2.27 Amphiphysin BAR domain from Drosophila

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.086174985769922 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle