| Protein: | lst-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 566 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lst-4.
| Description | E-value | Query Range |
Subject Range |
|
|
313.0 | [0..3] | [566..4] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MAQVKAEYDF QSQPNTGELS ISAGEVLTVI RENIDGGWIE GRNVRGSVGL FPESYVTPYQ 60
61 ASRPPPVLPP PLPPTSSGPP AASSRPFDDW GGASEVAAPP SYGAQHHHQP TPSVPEVTRS 120
121 SYPSQNDDFD DEWTDEDDEQ EPTRPNVQSS IGSNSRRDLS RSHSEHGGPD RGSNKVNKNI 180
181 NRFSNFVKSG VEAYVIGESK TTSQISERHE VVMNNGIIQW KPIQQYYTCI VDKPKKESKL 240
241 KGLKSFIAYS ITSSLTNIQR QVSRRYKHFD WLHEQLSAKY VLIPIPPLPE KQVAGRYEED 300
301 LIDHRKHILQ LWVNKICRHP VLSQSEVWLH FISCTDEKDW KNGKRRAEKD EYIGGAFLNC 360
361 ITVPH
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 1qcfA |
| Description: | Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [366-566] |
1 11 21 31 41 51
| | | | | |
1 QPLDPNNVDM QVERFQRSVK TSEEAMRVMQ ERMNMFQKVF AGPVKQNWQK MGSAFKTLQQ 60
61 SFEIDETVAS RRLTEALAYT ASEYHEIGQV FDAHTKNDME PVLENLYSYK GTVQNVPDII 120
121 QVHKQAVQKF RDSEGRLSSA EAEKMKQRID AMSYTVIAEV QHQTAEKVED MKSTMGTYLK 180
181 KQAMFYQEVA TKLTSLAARY D
|
| Detection Method: | |
| Confidence: | 2.27 |
| Match: | 1uruA |
| Description: | Amphiphysin BAR domain from Drosophila |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.086174985769922 | bayes_pls_golite062009 |
