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Protein Overview: lst-4

General Information:
Name(s) found: lst-4 / CE32245 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00003086 locus:lst-4 Sorting nexin lst-4 status:Confirmed UniProt:Q8I4E2 protein_id:CAA19487.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 592 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell communication [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    phosphoinositide binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFTSSLRKA VENYPTPPGG SSEDAHRQLL ERRRKQMLRR HTCSTLIKQD TSASPHKMKP  60
   61 PILMEEEDEQ HSTGKHSSRK SSFKKSGAIS KSVLPPPLPP TSSGPPAASS RPFDDWGGAS 120
  121 EVAAPPSYGA QHHHQPTPSV PEVTRSSYPS QNDDFDDEWT DEDDEQEPTR PNVQSSIGSN 180
  181 SRRDLSRSHS EHGGPDRGSN KVNKNINRFS NFVKSGVEAY VIGESKTTSQ ISERHEVVMN 240
  241 NGIIQWKPIQ QYYTCIVDKP KKESKLKGLK SFIAYSITSS LTNIQRQVSR RYKHFDWLHE 300
  301 QLSAKYVLIP IPPLPEKQVA GRYEEDLIDH RKHILQLWVN KICRHPVLSQ SEVWLHFISC 360
  361 TDEKDWKNGK RRAEKDEYIG GAFLNCITVP HQPLDPNNVD MQVERFQRSV KTSEEAMRVM 420
  421 QERMNMFQKV FAGPVKQNWQ KMGSAFKTLQ QSFEIDETVA SRRLTEALAY TASEYHEIGQ 480
  481 VFDAHTKNDM EPVLENLYSY KGTVQNVPDI IQVHKQAVQK FRDSEGRLSS AEAEKMKQRI 540
  541 DAMSYTVIAE VQHQTAEKVE DMKSTMGTYL KKQAMFYQEV ATKLTSLAAR YD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] MSA 14.222997 View MSA. No confident structure predictions are available.
    2 View Details [186..251] deduced N/A No confident structure predictions are available.
    3 View Details [252..528] PSI-BLAST 8.522879 No description for 2dybA was found.
    4 View Details [529..592] FFAS03 1.15 Amphiphysin BAR domain from Drosophila


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle