| Protein: | lst-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 592 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lst-4.
| Description | E-value | Query Range |
Subject Range |
|
|
370.0 | [0..24] | [592..45] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MLFTSSLRKA VENYPTPPGG SSEDAHRQLL ERRRKQMLRR HTCSTLIKQD TSASPHKMKP 60
61 PILMEEEDEQ HSTGKHSSRK SSFKKSGAIS KSVLPPPLPP TSSGPPAASS RPFDDWGGAS 120
121 EVAAPPSYGA QHHHQPTPSV PEVTRSSYPS QNDDFDDEWT DEDDEQEPTR PNVQSSIGSN 180
181 SRRDL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [186-251] |
1 11 21 31 41 51
| | | | | |
1 SRSHSEHGGP DRGSNKVNKN INRFSNFVKS GVEAYVIGES KTTSQISERH EVVMNNGIIQ 60
61 WKPIQQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [252-528] |
1 11 21 31 41 51
| | | | | |
1 YYTCIVDKPK KESKLKGLKS FIAYSITSSL TNIQRQVSRR YKHFDWLHEQ LSAKYVLIPI 60
61 PPLPEKQVAG RYEEDLIDHR KHILQLWVNK ICRHPVLSQS EVWLHFISCT DEKDWKNGKR 120
121 RAEKDEYIGG AFLNCITVPH QPLDPNNVDM QVERFQRSVK TSEEAMRVMQ ERMNMFQKVF 180
181 AGPVKQNWQK MGSAFKTLQQ SFEIDETVAS RRLTEALAYT ASEYHEIGQV FDAHTKNDME 240
241 PVLENLYSYK GTVQNVPDII QVHKQAVQKF RDSEGRL
|
| Detection Method: | |
| Confidence: | 8.522879 |
| Match: | 2dybA |
| Description: | No description for 2dybA was found. |
|
Region A: Residues: [529-592] |
1 11 21 31 41 51
| | | | | |
1 SSAEAEKMKQ RIDAMSYTVI AEVQHQTAEK VEDMKSTMGT YLKKQAMFYQ EVATKLTSLA 60
61 ARYD
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1uruA |
| Description: | Amphiphysin BAR domain from Drosophila |
Matching Structure (courtesy of the PDB): |
|
