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Protein Overview: xpo-1

General Information:
Name(s) found: xpo-1 / CE31142 [WormBase]
Description(s) found:
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  • WBGene00002078 locus:xpo-1 status:Confirmed UniProt:Q8MPS6 protein_id:CCD65777.1 [WormBase]
  • gi|25149812|ref|NP_741568.1| eXPOrtin (nuclear export receptor) family member (xpo-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|21328415|gb|AAM48564.1|U64855_2 Importin beta family protein 4, isoform b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31142 WBGene00002078 locus:imb-4 importin beta, nuclear transport factor status:Confirmed TR:Q8MPS6 protein_id:AAM48564.1 [wormpep150.fasta]
  • 31142 WBGene00002078 locus:imb-4 importin beta, nuclear transport factor status:Confirmed TR:Q8MPS6 protein_id:AAM48564.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • IMportin Beta (imb-4) [Caenorhabditis elegans]gi|21328415|gb|AAM48564.1| Importin beta family protein 4, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:imb-4 importin beta, nuclear transport factor status:Confirmed TR:Q8MPS6 protein_id:AAM48564.1 [wormpep115.fasta.reversed]
  • CE31142 WBGene00002078 locus:xpo-1 importin beta, nuclear transport factor status:Confirmed UniProt:Q8MPS6_CAEEL protein_id:AAM48564.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31142 WBGene00002078 locus:xpo-1 importin beta, nuclear transport factor status:Confirmed UniProt:Q8MPS6_CAEEL protein_id:AAM48564.1| [wormORF-contam.fasta]
  • IMportin Beta family member (imb-4) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Importin beta family protein 4, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31142 WBGene00002078 locus:xpo-1 importin beta, nuclear transport factor status:Confirmed UniProt:Q8MPS6 protein_id:AAM48564.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE31142 WBGene00002078 locus:xpo-1 importin beta, nuclear transport factor status:Confirmed UniProt:Q8MPS6 protein_id:CCD65777.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE31142 WBGene00002078 locus:xpo-1 status:Confirmed UniProt:Q8MPS6 protein_id:CCD65777.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q23089, EXPOrtin (Nuclear export receptor) OS=Caenorhabditis elegans GN=xpo-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 79 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    nuclear pore [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    intracellular protein transport [IEALink to PubMed article]
    protein import into nucleus, docking [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: protein transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQDQIRIII KGFFSFNTEI SSMRNHLRDF LIQIKEHNGE DTSDLYLEER EAEIQQAQQR  60
   61 KRDVPGILKP DEVEDEDMR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle