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Protein Overview: ccr-4

General Information:
Name(s) found: ccr-4 / CE31745 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00000376 locus:ccr-4 status:Confirmed UniProt:Q8I4B4 protein_id:CAD45610.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 597 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGDMTSEY KDKQGGGAGQ PLTKSENNDG KKTLTNGMSR VHRVLTEDEI ASGRSTRWTE  60
   61 LEIHGRVKNL SPSLWQLTHL SALFLNNNGL TRLPPEIAQL TNLTMLDISN NKLRSLPTEL 120
  121 GDMISLCHLY LNNNQLRVLP YELGKLFRIQ TLGLQGNPLS PEISKIYHET NGAQKILQFL 180
  181 LDHLTINTHP PPERNWVMIR HADPERPIAT FTVLCYNVLC DKYATVNQYS YCPSWALNWE 240
  241 YRKGLIIKEI RTYEADVITL QEVETEQFRT LFQPELKQLG YAGIFEAKSR AKTMGEEERK 300
  301 YVDGCAIFWK VDKFDMDKQY LFEFSSVAMK KASTSENMLN RVMPRDNIGL CAVLKIKESV 360
  361 YANKFLGRMQ IPMNDNVVGN PLVVATAHIH WDPEFCDVKL VQSMMLTHEV SRVLEEVSKK 420
  421 YQITQQQVPV LICGDFNSLP DSGVFEYLSK GQITRRHMDL KSFRDDSCLE KFTNSTDKNV 480
  481 ISHPLRLDSA CDINSIPFTN YTLDFKGMID YIFATPQSLA RLGILGPFDP QWVQSNKILG 540
  541 FPHPHVASDH IPIMAQYAII PTTHQRQQPL QQAGPAAGVI GGGFPSTPSG AQPFLRC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..504] PSI-BLAST 18.221849 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [505..597] FFAS03 1.35 No description for 2ddrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle