YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ccr-4

General Information:
Name(s) found: ccr-4 / CE31743 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00000376 locus:ccr-4 status:Confirmed UniProt:G5EE09 protein_id:CAB54511.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 606 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRVLKSDVM SSGDMTSEYK DKQGGGAGQP LTKSENNDGK KTLTNGMSRV HRVLTEDEIA  60
   61 SGRSTRWTEL EIHGRVKNLS PSLWQLTHLS ALFLNNNGLT RLPPEIAQLT NLTMLDISNN 120
  121 KLRSLPTELG DMISLCHLYL NNNQLRVLPY ELGKLFRIQT LGLQGNPLSP EISKIYHETN 180
  181 GAQKILQFLL DHLTINTHPP PERNWVMIRH ADPERPIATF TVLCYNVLCD KYATVNQYSY 240
  241 CPSWALNWEY RKGLIIKEIR TYEADVITLQ EVETEQFRTL FQPELKQLGY AGIFEAKSRA 300
  301 KTMGEEERKY VDGCAIFWKV DKFDMDKQYL FEFSSVAMKK ASTSENMLNR VMPRDNIGLC 360
  361 AVLKIKESVY ANKFLGRMQI PMNDNVVGNP LVVATAHIHW DPEFCDVKLV QSMMLTHEVS 420
  421 RVLEEVSKKY QITQQQVPVL ICGDFNSLPD SGVFEYLSKG QITRRHMDLK SFRDDSCLEK 480
  481 FTNSTDKNVI SHPLRLDSAC DINSIPFTNY TLDFKGMIDY IFATPQSLAR LGILGPFDPQ 540
  541 WVQSNKILGF PHPHVASDHI PIMAQYAIIP TTHQRQQPLQ QAGPAAGVIG GGFPSTPSGA 600
  601 QPFLRC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..403] PSI-BLAST 15.522879 No description for 2z64A was found.
    2 View Details [404..606] FFAS03 2.97 No description for 2ddrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle