Protein Overview: deb-1

General Information:
Name(s) found:	deb-1 / CE31397 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00000942 locus:deb-1 status:Confirmed UniProt:Q9BI31 protein_id:CCD66634.1 [WormBase] gi\|25151895\|ref\|NP_501105.2\| DEnse Body family member (deb-1) [Caenorhabditis elegans] [NCBI NR] gi\|21913086\|gb\|AAM81105.1\|U40802_9 Dense body protein 1, isoform b [Caenorhabditis elegans] [NCBI NR] [wormpep88.fasta] CE31397 WBGene00000942 locus:deb-1 status:Partially_confirmed TR:Q9BI31 protein_id:AAM81105.1 [wormpep150.fasta] 31397 WBGene00000942 locus:deb-1 status:Partially_confirmed TR:Q9BI31 protein_id:AAM81105.1 [wormpep130-phg-ecoli-orf-rand.fasta] DEnse Body component, vinculin, Paralysed Arrest at Two-fold PAT-8, muscle DEnse Body defective DEB-1 (pat-8) [Caenorhabditis elegans]gi\|21913086\|gb\|AAM81105.1\| Dense body protein 1, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] locus:deb-1 status:Partially_confirmed TR:Q9BI31 protein_id:AAM81105.1 [wormpep115.fasta.reversed] CE31397 WBGene00000942 locus:deb-1 status:Confirmed UniProt:Q9BI31_CAEEL protein_id:AAM81105.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE31397 WBGene00000942 locus:deb-1 status:Confirmed UniProt:Q9BI31_CAEEL protein_id:AAM81105.1\| [wormORF-contam.fasta] Dense body protein 1, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta] DEnse Body family member (deb-1) [Caenorhabditis elegans] [nr-271106-contam.fasta] CE31397 WBGene00000942 locus:deb-1 status:Confirmed TR:Q9BI31 protein_id:AAM81105.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE31397 WBGene00000942 locus:deb-1 status:Confirmed UniProt:Q9BI31 protein_id:AAM81105.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] CE31397 WBGene00000942 locus:deb-1 status:Confirmed UniProt:Q9BI31 protein_id:CCD66634.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] Isoform of P19826, DEnse Body OS=Caenorhabditis elegans GN=deb-1 PE=1 SV=2 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	369 amino acids
Gene Ontology:
Cellular Component:	actin cytoskeleton [IEA]
Biological Process:	cell adhesion [IEA] reproduction [IMP]
Molecular Function:	structural molecule activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPINRYSSSV SDHYDSSDEY DNYSEQNYEY VYKTRLVPFN PQVLITIPPM VNNAKQIAQN  60
   61 PHDQYAAQNW RGTNDHLLNS VRAVGDAITG VPMSNGRHSS YQESISRASP YNPPPPSSQV 120
  121 IRSVNASPPT APIIHNKMII REDIPAPPRP PPPVELSPPP RPPPPPEYDE EEETRAFWER 180
  181 YPLPQASHQP MLAAAHNLHN ELKQWSSQEN DIVAAAKRMA ILMARLSQLV RGEGGTKKDL 240
  241 INCSKAIADS SEEVTRLAVQ LARLCTDIKM RTALLQVSER IPTIATQLKV LSTVKATMLG 300
  301 SANVIGPYGQ PVEGSEEDDE AMQQLVHNAQ NLMQSVKDVV RAAEAASIKI RTNSGLRLRW 360
  361 LRKPMWSNF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..369]	PSI-BLAST	83.39794	Crystal structure of human full-length vinculin (residues 1-1066)

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: deb-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: