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Protein Overview: deb-1

General Information:
Name(s) found: deb-1 / CE31397 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00000942 locus:deb-1 status:Confirmed UniProt:Q9BI31 protein_id:CCD66634.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 369 amino acids

    Gene Ontology:
    Cellular Component: actin cytoskeleton [IEALink to PubMed article]
    Biological Process: cell adhesion [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: structural molecule activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPINRYSSSV SDHYDSSDEY DNYSEQNYEY VYKTRLVPFN PQVLITIPPM VNNAKQIAQN  60
   61 PHDQYAAQNW RGTNDHLLNS VRAVGDAITG VPMSNGRHSS YQESISRASP YNPPPPSSQV 120
  121 IRSVNASPPT APIIHNKMII REDIPAPPRP PPPVELSPPP RPPPPPEYDE EEETRAFWER 180
  181 YPLPQASHQP MLAAAHNLHN ELKQWSSQEN DIVAAAKRMA ILMARLSQLV RGEGGTKKDL 240
  241 INCSKAIADS SEEVTRLAVQ LARLCTDIKM RTALLQVSER IPTIATQLKV LSTVKATMLG 300
  301 SANVIGPYGQ PVEGSEEDDE AMQQLVHNAQ NLMQSVKDVV RAAEAASIKI RTNSGLRLRW 360
  361 LRKPMWSNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..369] PSI-BLAST 83.39794 Crystal structure of human full-length vinculin (residues 1-1066)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle