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Protein Overview: set-23

General Information:
Name(s) found: set-23 / CE31647 [WormBase]
Description(s) found:
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  • WBGene00021515 locus:set-23 Probable histone-lysine N-methyltransferase set-23 status:Partially_confirmed UniProt:Q95Y12 protein_id:CCD66713.1 [WormBase]
  • gi|25148426|ref|NP_741321.1| SET (trithorax/polycomb) domain containing family member (set-23) [Caenorhabditis elegans] [NCBI NR]
  • gi|22532827|gb|AAM97972.1| Set (trithorax/polycomb) domain containing protein 23, isoform b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31647 WBGene00021515 status:Partially_confirmed TR:Q8MXT0 protein_id:AAM97972.1 [wormpep150.fasta]
  • 31647 WBGene00021515 status:Partially_confirmed TR:Q8MXT0 protein_id:AAM97972.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • SET domain mariner transposase fusion gene (4C373) [Caenorhabditis elegans]gi|22532827|gb|AAM97972.1| Hypothetical protein Y41D4B.12b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q8MXT0 protein_id:AAM97972.1 [wormpep115.fasta.reversed]
  • CE31647 WBGene00021515 locus:set-23 status:Partially_confirmed UniProt:Y41D4_CAEEL protein_id:AAM97972.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31647 WBGene00021515 locus:set-23 status:Partially_confirmed UniProt:Y41D4_CAEEL protein_id:AAM97972.1| [wormORF-contam.fasta]
  • Y41D4B.12b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y41D4B.12b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31647 WBGene00021515 locus:set-23 status:Partially_confirmed SW:Q95Y12 protein_id:AAM97972.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE31647 WBGene00021515 locus:set-23 status:Partially_confirmed UniProt:Q95Y12 protein_id:AAM97972.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31647 WBGene00021515 locus:set-23 status:Partially_confirmed UniProt:Q95Y12 protein_id:CCD66713.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE31647 WBGene00021515 locus:set-23 status:Partially_confirmed UniProt:Q95Y12 protein_id:CCD66713.1 Probable histone-lysine N-methyltransferase set-23 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q95Y12, Isoform b of Probable histone-lysine N-methyltransferase set-23 OS=Caenorhabditis elegans GN=set-23 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 159 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: chromatin modification [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    histone-lysine N-methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLHTAPNFI TCEMAKGFGV RAGEQIAAGE FVCEYAGECI GEQEVERRCR EFRGDDNYTL  60
   61 TLKEFFGGKP VKTFVDPRLR GNIGRFLNHS CEPNCEIILA RLGRMIPAAG IFAKRDIVRG 120
  121 EELCYDYGHS AIEGENRKLC LCKSEKCRKY LPMSATPIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] PSI-BLAST 29.30103 No description for 2igqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle