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Protein Overview: snn-1

General Information:
Name(s) found: snn-1 / CE31645 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004913 locus:snn-1 status:Confirmed UniProt:Q8MXU3 protein_id:CCD72728.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: synaptic vesicle [IEALink to PubMed article]
    Biological Process: neurotransmitter secretion [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFFKRKFSF SEDEGEPMDD VNSGPPSSFS FQSIANKVSN TISAPTSPAK SRESLAAALE  60
   61 RSLNHDRSRG EPLMKDAKVL LVIDSHHVDW SKYFRNHTEY AIRVEQGDID ELDVMCTEKN 120
  121 CTVELNTPGK DVRTFTPSAV FLGAGATRCA QLKTITRAFI AAHIPFLNSH TSAVAFLDRN 180
  181 NLKKQLKKIT LSDGASIPML PIVHYPHFHK FHQSQSSTYP MVVSVNEGFQ GIGKIKVNNH 240
  241 EELCDVEGML QIMSKGDTEV EVQPFVDAKY DLHIQKIGHE YKTFIRRGIC KHWKSNVGSS 300
  301 VLEQISTCER HKKYLKAITD HVGPMHICSI DILVSKEGRE FVHDVNDVIA YFGESAEDDR 360
  361 RAASLLLRAL VAPRITSPIA AEPPATSPTT SAVTNGHGNH GPAPAVPTRR LPPHPSSSSA 420
  421 APPRGHMSDK VESRHKDHYD PPPQIPRTGS RESVSYVDDT MGQLKRTFAG FFGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..370] PSI-BLAST 72.045757 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    2 View Details [371..474] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle