| Protein: | snn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 474 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
341.0 | [0..1] | [474..1] |
|
Region A: Residues: [1-370] |
1 11 21 31 41 51
| | | | | |
1 MNFFKRKFSF SEDEGEPMDD VNSGPPSSFS FQSIANKVSN TISAPTSPAK SRESLAAALE 60
61 RSLNHDRSRG EPLMKDAKVL LVIDSHHVDW SKYFRNHTEY AIRVEQGDID ELDVMCTEKN 120
121 CTVELNTPGK DVRTFTPSAV FLGAGATRCA QLKTITRAFI AAHIPFLNSH TSAVAFLDRN 180
181 NLKKQLKKIT LSDGASIPML PIVHYPHFHK FHQSQSSTYP MVVSVNEGFQ GIGKIKVNNH 240
241 EELCDVEGML QIMSKGDTEV EVQPFVDAKY DLHIQKIGHE YKTFIRRGIC KHWKSNVGSS 300
301 VLEQISTCER HKKYLKAITD HVGPMHICSI DILVSKEGRE FVHDVNDVIA YFGESAEDDR 360
361 RAASLLLRAL
|
| Detection Method: |  |
| Confidence: | 72.045757 |
| Match: | 1pk8A |
| Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [371-474] |
1 11 21 31 41 51
| | | | | |
1 VAPRITSPIA AEPPATSPTT SAVTNGHGNH GPAPAVPTRR LPPHPSSSSA APPRGHMSDK 60
61 VESRHKDHYD PPPQIPRTGS RESVSYVDDT MGQLKRTFAG FFGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
