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Protein Overview: CE32000

General Information:
Name(s) found: CE32000 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00012245 status:Confirmed UniProt:G5EE97 protein_id:CAA99945.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 705 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    mRNA processing [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRQGYGVS SYPHYPQQQQ QIVFGQMRMP GQHTPAQQSS QQKPDSSPVF VGNISDKCSD  60
   61 EFIRKILNEC GNVASWKRIK GSNGKLQGFG FCHFTDLEGT LRALRILHEF HLGDKKLTVK 120
  121 PDEKVRDDLR KNAIENRKRQ GKKELKLKHD ELPADEDDLK KDEEIRLKIL HWMETDHKEL 180
  181 FSITEDGELS DETKKVKGHD SKIEKQTVPS SSSNPKKDEH KRNRNRRSRS RTRSRERTSR 240
  241 RSRSKESPRS KRSRRSRSSS NSSSESDSSS SRSSSYSSRS RSRTPQRSRT SKRRRSNSHA 300
  301 SEDSDDAREK RAFKQMMLDK KQAYLARLKR WESRERQMSK RYEREERKEK DRKKTLQKEG 360
  361 KRLKLFLEDY DDEKDDPKYY TSSQFFQRKR DYEREREADQ KDRMQEQQEI EELKRQIMEE 420
  421 AANDESINIE EEARKRHKLK EEEAMRKMRA DSGSPNPHQP LGQSANGEKS SSEEESDSEK 480
  481 TDVKKEIKDE IKEEPIDVDI SEHVDPNTGS SGTNGNFGWK AIGDDSSLNT KINRPIANGN 540
  541 QNQPQIKKEA SPIPIAQRLS GVFGNDDDED DVHSKKKLKP FEITREERMQ VMSAEEKREL 600
  601 TKQIIKTIPA TKDELFVHRI EWDQLDGKWM NDRIRPWVAK KVTQFLGEED KSFCDFICDQ 660
  661 IEKQATPQEI LKDVAVIIDE DAEQFVIKMW RLLIYEGQAR RLGIT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 12.39794 Poly(A)-binding protein
    2 View Details [136..320] deduced N/A No confident structure predictions are available.
    3 View Details [321..705] PSI-BLAST 12.154902 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle